RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 UPK3AO75631 287 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 RP2O75695 350 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 UGT2B17O75795 530 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 RSL1D1O76021 490 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 URI1O94763 535 aaPredicted RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 AKR7A3O95154 331 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 GSTA1P08263 222 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 INHBAP08476 426 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 KRT16P08779 473 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 GATA3P23771 443 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 ARR3P36575 388 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 FRKP42685 505 aaPredicted RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 RAD52P43351 418 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 MAGEA12P43365 314 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 CAPZA2P47755 286 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 IDH2P48735 452 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 CCT3P49368 545 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 BLOC1S1P78537 153 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 LCN2P80188 198 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 MRPS11P82912 194 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 CAV1Q03135 178 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 CEACAM7Q14002 265 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 MAD2L1BPQ15013 274 aaPredicted RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 KIAA0040Q15053 153 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 ALKBH6Q3KRA9 238 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 SPDYE7PQ495Y7 208 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 SAXO2Q658L1 398 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM225Q6GV28 225 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 PAQR6Q6TCH4 344 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 OLIG3Q7RTU3 272 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 GRINAQ7Z429 371 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 LRP11Q86VZ4 500 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 C10orf67Q8IYJ2 551 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 KIR3DL3Q8N743 410 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 CCNYL1Q8N7R7 359 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM99Q8N816 258 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 OR56A1Q8NGH5 318 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 OR5D16Q8NGK9 328 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 FBXO25Q8TCJ0 367 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 MAGEE2Q8TD90 523 aaPredicted RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 PMM1Q92871 262 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 RAB8BQ92930 207 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 DDIT4LQ96D03 193 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 C1orf147Q96MC9 270 aaPredicted RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 OR7D2Q96RA2 312 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 SDF2Q99470 211 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 ARPC5LQ9BPX5 153 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 SIRT3Q9NTG7 399 aaPredicted RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM216Q9P0N5 145 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 TESQ9UGI8 421 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 NUP50Q9UKX7 468 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 FZR1Q9UM11 496 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 PCDHGB4Q9UN71 923 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 STK38LQ9Y2H1 464 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMED7Q9Y3B3 224 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 NOX1Q9Y5S8 564 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 RYR1P21817 5038 aa4.38□□□□□ -1.71
TUBGCP4-209ENST00000564511 A0A1W2PPW3 197 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 TMEM72A0PK05 275 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 TRIM49D1C9J1S8 452 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 RAD51CO43502 376 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 SCN2BO60939 215 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 STX11O75558 287 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 IGHV2-5P01817 119 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 BCKDHAP12694 445 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 SDC1P18827 310 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 PHBP35232 272 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 GLRXP35754 106 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 PGM1P36871 562 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 MAGEB1P43366 347 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 HTR3AP46098 478 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 SERPINB9P50453 376 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 SH3BGRP55822 239 aaPredicted RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 CCL8P80075 99 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 ARF1P84077 181 aaKnown RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 ROR2Q01974 943 aaKnown RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 PIGFQ07326 219 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 PDE7AQ13946 482 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 SLC9A3R2Q15599 337 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 OR7A5Q15622 319 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 ZNF141Q15928 474 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 MAPK14Q16539 360 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 TRMT5Q32P41 509 aaKnown RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 ATP6AP1LQ52LC2 224 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 RFTN2Q52LD8 501 aaPredicted RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 ARMCX4Q5H9R4 360 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 GKAP1Q5VSY0 366 aaPredicted RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 NIPAL3Q6P499 406 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 CREB3L2Q70SY1 520 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 LINGO2Q7L985 606 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 R3HCC1LQ7Z5L2 792 aaKnown RBP4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 MDP1Q86V88 176 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 SLC22A9Q8IVM8 553 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 WDFY1Q8IWB7 410 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 CMIPQ8IY22 773 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 OR5AK3PQ8NH89 298 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 KIF18AQ8NI77 898 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 TSPEARQ8WU66 669 aa4.37□□□□□ -1.71
TUBGCP4-209ENST00000564511 MTERF3Q96E29 417 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms