RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 WNT1P04628 370 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 UCHL1P09936 223 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 HMGA2P52926 109 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 NFATC3Q12968 1075 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 HNRNPA0Q13151 305 aaKnown RBP6.91□□□□□ -1.3
TCF4-216ENST00000562680 EIF2B1Q14232 305 aaKnown RBP6.91□□□□□ -1.3
TCF4-216ENST00000562680 TIGD3Q6B0B8 471 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 LINGO2Q7L985 606 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 PHB2Q99623 299 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 NIPSNAP1Q9BPW8 284 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 LHPPQ9H008 270 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 IL20RAQ9UHF4 553 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 KLK4Q9Y5K2 254 aa6.91□□□□□ -1.3
TCF4-216ENST00000562680 ZDBF2Q9HCK1 2354 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ALG1L2C9J202 215 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 CYR61O00622 381 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 IMPA2O14732 288 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 TERTO14746 1132 aaKnown RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 DNAJB6O75190 326 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 IFNA10P01566 189 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ITGA5P08648 1049 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SLC2A2P11168 524 aaPredicted RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 PIGFQ07326 219 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SRSF5Q13243 272 aaKnown RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ANKRD37Q7Z713 158 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 FBXO8Q9NRD0 319 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 CMC2Q9NRP2 79 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 HHLA2Q9UM44 414 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ACOD1A6NK06 481 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ADAM10O14672 748 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ICOSLGO75144 302 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 MRPL33O75394 65 aaKnown RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 FUT7Q11130 342 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 AIMP2Q13155 320 aaKnown RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 ARFRP1Q13795 201 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 OXA1LQ15070 435 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SAPCD1Q5SSQ6 148 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 TBPL2Q6SJ96 375 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 WDR88Q6ZMY6 472 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SLC35D2Q76EJ3 337 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 AAED1Q7RTV5 226 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 NKAIN4Q8IVV8 208 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 AMER3Q8N944 861 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ELP5Q8TE02 316 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 C7orf34Q96L11 122 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ZNF582Q96NG8 517 aaPredicted RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 ALG12Q9BV10 488 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 TINAGL1Q9GZM7 467 aaPredicted RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 CHST11Q9NPF2 352 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 FRMPD3Q5JV73 1810 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 A0A1W2PQD3 144 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 METTL15A6NJ78 407 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 CBR3O75828 277 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SULT1C4O75897 302 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ISL1P61371 349 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 EMX1Q04741 257 aaPredicted RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 IL10RAQ13651 578 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 AVPI1Q5T686 147 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 C3P1Q6ZMU1 363 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 TPRA1Q86W33 373 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 ENTHD1Q8IYW4 607 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 CLRN3Q8NCR9 226 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 OR1M1Q8NGA1 313 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SAP25Q8TEE9 199 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 RBPMSQ93062 196 aaKnown RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 MUL1Q969V5 352 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 BSCL2Q96G97 398 aaPredicted RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 CMTM3Q96MX0 182 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 B3GNT4Q9C0J1 378 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 CDH20Q9HBT6 801 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SMURF1Q9HCE7 757 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 KCNG2Q9UJ96 466 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 EMC9Q9Y3B6 208 aa6.9□□□□□ -1.3
TCF4-216ENST00000562680 RBM7Q9Y580 266 aaKnown RBP6.9□□□□□ -1.3
TCF4-216ENST00000562680 PTPRDP23468 1912 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 IQCMA0A1B0GVH7 501 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 POM121CA8CG34 1229 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 ZNF891A8MT65 544 aaPredicted RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 LRRN3E7EW58 273 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 GLCEO94923 617 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 SP9P0CG40 484 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 AZGP1P25311 298 aaKnown RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 SOX2P48431 317 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 RPL27P61353 136 aaKnown RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 PRICKLE2Q7Z3G6 844 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 KDF1Q8NAX2 398 aaPredicted RBP6.9□□□□□ -1.31
TCF4-216ENST00000562680 CA5BP1Q8WTZ4 195 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 CCDC107Q8WV48 283 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 ZFP3Q96NJ6 502 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 EXTL2Q9UBQ6 330 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 TMEM129A0AVI4 362 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 CBX7O95931 251 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 OR3A2P47893 321 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 PPP1CAP62136 330 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 MC2RQ01718 297 aa6.9□□□□□ -1.31
TCF4-216ENST00000562680 CRMP1Q14194 572 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms