RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RBMXL3Q8N7X1 1067 aaKnown RBP9.2□□□□□ -0.94
USP3-219ENST00000561326 OR6K6Q8NGW6 343 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 EXTL1Q92935 676 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 PNPLA2Q96AD5 504 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 SARAFQ96BY9 339 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 INTS12Q96CB8 462 aaKnown RBP9.2□□□□□ -0.94
USP3-219ENST00000561326 TXNDC15Q96J42 360 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 TIMP4Q99727 224 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 RHNO1Q9BSD3 238 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 MND1Q9BWT6 205 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 HCAR1Q9BXC0 346 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 FAM192AQ9GZU8 254 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 RACGAP1Q9H0H5 632 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 TSPAN10Q9H1Z9 355 aaPredicted RBP9.2□□□□□ -0.94
USP3-219ENST00000561326 RERGLQ9H628 205 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 ACOT13Q9NPJ3 140 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 B3GAT1Q9P2W7 334 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 TUBD1Q9UJT1 453 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 ARHGAP21Q5T5U3 1957 aa9.2□□□□□ -0.94
USP3-219ENST00000561326 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 ZGRF1Q86YA3 2104 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 MAP1BP46821 2468 aaKnown RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 A0A1B0GVC2 190 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 SMIM31A0A1B0GVY4 71 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 DAPL1A0PJW8 107 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 SLC35F4A4IF30 521 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 CCDC182A6NF36 153 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 A6NHS1 94 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 H0YC42 278 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 AQP7O14520 342 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 GPR171O14626 319 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 MYL12BO14950 172 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 SMAD9O15198 467 aaKnown RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 TRAF3IP2O43734 574 aaPredicted RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 SLC16A7O60669 478 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 CYTIPO60759 359 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 TRMUO75648 421 aaKnown RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 HLA-DQA2P01906 255 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 GYPBP06028 91 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 SBK2P0C263 348 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 OR2T7P0C7T2 308 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 C1QTNF9P0C862 333 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 CLUP10909 449 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 PCMT1P22061 227 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 GSTT1P30711 240 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 GUCA1AP43080 201 aaPredicted RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 CLDN17P56750 224 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 ACTC1P68032 377 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 ACTA1P68133 377 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 GLO1Q04760 184 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 GGTLC2Q14390 218 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 IRF3Q14653 427 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 MELKQ14680 651 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 RNPS1Q15287 305 aaKnown RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 PLEKHN1Q494U1 663 aaPredicted RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 NADK2Q4G0N4 442 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 KRTCAP3Q53RY4 240 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 NHLRC1Q6VVB1 395 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 TMPRSS11AQ6ZMR5 421 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 ZBTB46Q86UZ6 589 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 OR6V1Q8N148 313 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 NANOGP1Q8N7R0 232 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 EXD3Q8N9H8 876 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 SYT14Q8NB59 555 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 OR4F15Q8NGB8 312 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 OR9K2Q8NGE7 335 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 OR51G2Q8NGK0 314 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 OR2T27Q8NH04 317 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 ZCCHC14Q8WYQ9 949 aaKnown RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 ROBO4Q8WZ75 1007 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 ZMYND19Q96E35 227 aaPredicted RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 SIGLEC11Q96RL6 698 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 CNN2Q99439 309 aaKnown RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 SRXN1Q9BYN0 137 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 NUAK2Q9H093 628 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 SYT4Q9H2B2 425 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 PARPBPQ9NWS1 579 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 MED29Q9NX70 200 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 EMC3Q9P0I2 261 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 KLHL9Q9P2J3 617 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 KLHL13Q9P2N7 655 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 B9D1Q9UPM9 204 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 CAMK2AQ9UQM7 478 aa9.19□□□□□ -0.94
USP3-219ENST00000561326 NCOA6Q14686 2063 aaPredicted RBP9.19□□□□□ -0.94
USP3-219ENST00000561326 IGHV3-15A0A0B4J1V0 119 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 TMEM129A0AVI4 362 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 OR14I1A6ND48 311 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 ZNF814B7Z6K7 855 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 H7C1C5 153 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 CACNA1AO00555 2505 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 CACNA1GO43497 2377 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 KHDRBS3O75525 346 aaKnown RBP9.18□□□□□ -0.94
USP3-219ENST00000561326 IGHA1P01876 353 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 PSMB9P28065 219 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 PYCR1P32322 319 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 MAP2K4P45985 399 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 CAPZA2P47755 286 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 LCN6P62502 163 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms