RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM1-230ENST00000561266 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
TPM1-230ENST00000561266 SLC25A44Q96H78 314 aaPredicted RBP12.13□□□□□ -0.47
TPM1-230ENST00000561266 BTBD10Q9BSF8 475 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 GLTPQ9NZD2 209 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 IL20RAQ9UHF4 553 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 ZNF346Q9UL40 294 aaKnown RBP12.13□□□□□ -0.47
TPM1-230ENST00000561266 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 VPS13CQ709C8 3753 aa12.13□□□□□ -0.47
TPM1-230ENST00000561266 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 IGHV1-18A0A0C4DH31 117 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ZNF99A8MXY4 864 aaPredicted RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 ABCD4O14678 606 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 IMPA2O14732 288 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 GYG2O15488 501 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 GSC2O15499 205 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 GADD45GO95257 159 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 RAF1P04049 648 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 CD3EP07766 207 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 CD40P25942 277 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 IFNA8P32881 189 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 CSNK1A1P48729 337 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ERFP50548 548 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 NR1H2P55055 460 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 CTXN1P60606 82 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 PRPS1P60891 318 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ERVK-25P63136 954 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 TGFBR3Q03167 851 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 DBPQ10586 325 aaPredicted RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 TOP3AQ13472 1001 aaPredicted RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 ALG10Q5BKT4 473 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 OAFQ86UD1 273 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ADGRG5Q8IZF4 528 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 OR4C15Q8NGM1 316 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ZNF519Q8TB69 540 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 MAGEE2Q8TD90 523 aaPredicted RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 ASB9Q96DX5 294 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
TPM1-230ENST00000561266 ZNF75AQ96N20 296 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 TSPAN32Q96QS1 320 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ULBP2Q9BZM5 246 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 TXNIPQ9H3M7 391 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 SIGLEC7Q9Y286 467 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 AMDHD2Q9Y303 409 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 ADAM18Q9Y3Q7 739 aa12.12□□□□□ -0.47
TPM1-230ENST00000561266 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
TPM1-230ENST00000561266 ARPC4-TTLL3A0A0A6YYG9 625 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 E7EQL1 145 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 HS3ST1O14792 307 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 SLC2A10O95528 541 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 IGHMP01871 453 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 SOD3P08294 240 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 QDPRP09417 244 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 PATE4P0C8F1 98 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 B4GALT1P15291 398 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 ACADSP16219 412 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 FMODQ06828 376 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 PGGHGQ32M88 737 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
TPM1-230ENST00000561266 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 ZNF627Q7L945 461 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 KRTAP1-3Q8IUG1 177 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 MCHR2Q969V1 340 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 ZNF566Q969W8 418 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 ALPK1Q96QP1 1244 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 KCNK17Q96T54 332 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 MUC13Q9H3R2 512 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 ESRP2Q9H6T0 727 aaKnown RBP12.11□□□□□ -0.47
TPM1-230ENST00000561266 B3GNT2Q9NY97 397 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 LYVE1Q9Y5Y7 322 aa12.11□□□□□ -0.47
TPM1-230ENST00000561266 HTR3EA5X5Y0 456 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 H7C1C5 153 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 DHHO43323 396 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
TPM1-230ENST00000561266 IGLV1-44P01699 117 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 CD8AP01732 235 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 HLA-HP01893 362 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 DANCRP0C864 163 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 ITGA2P17301 1181 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 DNASE1P24855 282 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 CALCRP30988 508 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 ACVR1BP36896 505 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 SLC9A3P48764 834 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 HMGA2P52926 109 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 ART1P52961 327 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 RPL27P61353 136 aaKnown RBP12.1□□□□□ -0.47
TPM1-230ENST00000561266 LCN6P62502 163 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 TRAP1Q12931 704 aaKnown RBP12.1□□□□□ -0.47
TPM1-230ENST00000561266 KEAP1Q14145 624 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 DEFB113Q30KQ7 82 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 MTX3Q5HYI7 312 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 ZNF770Q6IQ21 691 aaPredicted RBP12.1□□□□□ -0.47
TPM1-230ENST00000561266 ZNF813Q6ZN06 617 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 FAM122BQ7Z309 247 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 MDP1Q86V88 176 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms