RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR6N1Q8NGY5 312 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 OR51A7Q8NH64 312 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF566Q969W8 418 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 GPA33Q99795 319 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 FOXC2Q99958 501 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 THTPAQ9BU02 230 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 TXNIPQ9H3M7 391 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 CRNNQ9UBG3 495 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 EDARQ9UNE0 448 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 A0A1W2PRG6 482 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 SH3PXD2BA1X283 911 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 M0R1B8 84 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ABCD4O14678 606 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 TRMUO75648 421 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 SEC14L2O76054 403 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 IGHMP01871 453 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 FABP3P05413 133 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 SAGP10523 405 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ACADSP16219 412 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF133P52736 654 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ART1P52961 327 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 TUBA1BP68363 451 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 TUBA4AP68366 448 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 SPOCK1Q08629 439 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 BNIP1Q12981 228 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 DEFB113Q30KQ7 82 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF672Q499Z4 452 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 FGD3Q5JSP0 725 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 TMEM108Q6UXF1 575 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 TUBA1AQ71U36 451 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 OAFQ86UD1 273 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ZDHHC21Q8IVQ6 265 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 FAM169BQ8N8A8 192 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 OR4K5Q8NGD3 323 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 OR52J3Q8NH60 311 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 HDAC2Q92769 488 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ASB9Q96DX5 294 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 ULBP2Q9BZM5 246 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 B3GNT2Q9NY97 397 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 TMEM5Q9Y2B1 443 aa13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 MAGED1Q9Y5V3 778 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-213ENST00000560856 RTTNQ86VV8 2226 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 IGHV1-18A0A0C4DH31 117 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 WNT11O96014 354 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 IGLV1-44P01699 117 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 DANCRP0C864 163 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 HMGA2P52926 109 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 FXYD6P3P58550 94 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 CTXN1P60606 82 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ZBED5Q49AG3 693 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 KLHL17Q6TDP4 642 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 KLHL24Q6TFL4 600 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 B3GLCTQ6Y288 498 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 SPNS3Q6ZMD2 512 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ZER1Q7Z7L7 766 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 CDK20Q8IZL9 346 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 MCUR1Q96AQ8 359 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 FAM46AQ96IP4 442 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF75AQ96N20 296 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ALPK1Q96QP1 1244 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF347Q96SE7 839 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF224Q9NZL3 707 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF346Q9UL40 294 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 SIGLEC7Q9Y286 467 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 POFUT2Q9Y2G5 429 aa13.31□□□□□ -0.28
SNRPA1-213ENST00000560856 MCIDASD6RGH6 385 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 E7EQL1 145 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 GYG2O15488 501 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 DHHO43323 396 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 GADD45GO95257 159 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 IGKV3-15P01624 115 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 IGHG1P01857 330 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 QDPRP09417 244 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 CBR1P16152 277 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 PAX7P23759 505 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 HOXC12P31275 282 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 RRM2P31350 389 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 DAP3P51398 398 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 SMIM11AP58511 58 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 UBE2NP61088 152 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 RPL27P61353 136 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 SPIBQ01892 262 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 TRAP1Q12931 704 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 TAF11Q15544 211 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 PGGHGQ32M88 737 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 C3orf36Q3SXR2 165 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF813Q6ZN06 617 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 RRM2BQ7LG56 351 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 IGFN1Q86VF2 1251 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 KRTAP1-3Q8IUG1 177 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 LURAP1LQ8IV03 231 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 CCDC36Q8IYA8 594 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 SYT14Q8NB59 555 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms