RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 CYLC2Q14093 348 aaPredicted RBP15.31■□□□□ 0.04
HDDC3-205ENST00000559898 GGTLC2Q14390 218 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 RAB39AQ14964 217 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 EFNB3Q15768 340 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 ZNF627Q7L945 461 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 OR8J3Q8NGG0 315 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 MOSPD2Q8NHP6 518 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 SH3GL3Q99963 347 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 ECSITQ9BQ95 431 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 EVA1AQ9H8M9 152 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 NANSQ9NR45 359 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 CMTM6Q9NX76 183 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 GLTPQ9NZD2 209 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 MYEF2Q9P2K5 600 aaKnown RBP15.31■□□□□ 0.04
HDDC3-205ENST00000559898 FZR1Q9UM11 496 aa15.31■□□□□ 0.04
HDDC3-205ENST00000559898 A8MV72 311 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-205ENST00000559898 F13BP05160 661 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 TROVE2P10155 538 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDDC3-205ENST00000559898 UMPSP11172 480 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 ZNF35P13682 527 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 SLC25A16P16260 332 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 NPR2P20594 1047 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 DSCR9P59020 149 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 VLDLRP98155 873 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 DAG1Q14118 895 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 GSG1Q2KHT4 349 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 MMEL1Q495T6 779 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 IL17RELQ6ZVW7 336 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 HIPK1Q86Z02 1210 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 SLC30A8Q8IWU4 369 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 PAQR4Q8N4S7 273 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-205ENST00000559898 OR4F15Q8NGB8 312 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 OR6X1Q8NH79 312 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 RCN3Q96D15 328 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 ZNF347Q96SE7 839 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 MRPL37Q9BZE1 423 aaKnown RBP15.3■□□□□ 0.04
HDDC3-205ENST00000559898 TPK1Q9H3S4 243 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 SNX13Q9Y5W8 968 aa15.3■□□□□ 0.04
HDDC3-205ENST00000559898 IGKV1D-43A0A0B4J1Z2 117 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 BLOC1S5-TXNDC5H3BN57 136 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 TLX2O43763 284 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-205ENST00000559898 OR6A2O95222 327 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 PGA4P0DJD7 388 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 PGA3P0DJD8 388 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 CCL2P13500 99 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 NR4A1P22736 598 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 AQP2P41181 271 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 NR4A2P43354 598 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 PDLIM4P50479 330 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 RAB1AP62820 205 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 RPL18Q07020 188 aaKnown RBP15.29■□□□□ 0.04
HDDC3-205ENST00000559898 LRRC23Q53EV4 343 aaPredicted RBP15.29■□□□□ 0.04
HDDC3-205ENST00000559898 CYBRD1Q53TN4 286 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 INTS11Q5TA45 600 aaKnown RBP15.29■□□□□ 0.04
HDDC3-205ENST00000559898 ZNF442Q9H7R0 627 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 RIMS3Q9UJD0 308 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 ZNF229Q9UJW7 825 aa15.29■□□□□ 0.04
HDDC3-205ENST00000559898 LRP5LA4QPB2 252 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 J3KTA2 159 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 PDE5AO76074 875 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 OR7A10O76100 309 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 ADRA2AP08913 450 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 QDPRP09417 244 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 USF1P22415 310 aaPredicted RBP15.28■□□□□ 0.04
HDDC3-205ENST00000559898 IL2RGP31785 369 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 YAP1P46937 504 aaKnown RBP15.28■□□□□ 0.04
HDDC3-205ENST00000559898 PPOXP50336 477 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 SEC24CP53992 1094 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 TAS2R41P59536 307 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 MAD2L1BPQ15013 274 aaPredicted RBP15.28■□□□□ 0.04
HDDC3-205ENST00000559898 COQ5Q5HYK3 327 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 VTCN1Q7Z7D3 282 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 SYT14Q8NB59 555 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 PROX1Q92786 737 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 MPP4Q96JB8 637 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 SYT3Q9BQG1 590 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 BPESC1Q9GZL8 116 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 B3GAT2Q9NPZ5 323 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 RHCGQ9UBD6 479 aa15.28■□□□□ 0.04
HDDC3-205ENST00000559898 FAM220BPB1ANY3 271 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 MT-ND1P03886 318 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 BMP4P12644 408 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 TCN1P20061 433 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-205ENST00000559898 KDELR2P33947 212 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 ERVS71-1P61550 626 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 LAPTM4AQ15012 233 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 NANOGNBQ7Z5D8 188 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 TREML1Q86YW5 311 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 MICU2Q8IYU8 434 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 SLC22A24Q8N4F4 322 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 CLDN22Q8N7P3 220 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 ZNF566Q969W8 418 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 SLC25A44Q96H78 314 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-205ENST00000559898 TPD52L3Q96J77 140 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 OR51B6Q9H340 312 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 TMEM38BQ9NVV0 291 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 A4GNTQ9UNA3 340 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 FKBP7Q9Y680 259 aa15.27■□□□□ 0.04
HDDC3-205ENST00000559898 BBIP1A8MTZ0 92 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 DHHO43323 396 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms