RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 MRPL33O75394 65 aaKnown RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 GYPBP06028 91 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 GABRB1P18505 474 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 CSNK1A1P48729 337 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 CENPAP49450 140 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 SELENOPP49908 381 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 NUDT6P53370 316 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 PER3P56645 1201 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 RPS7P62081 194 aaKnown RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 SIRPAP78324 504 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 CDK5R2Q13319 367 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 ZNF362Q5T0B9 420 aaPredicted RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 RTL6Q6ICC9 239 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 DOLPP1Q86YN1 238 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 GCNT2Q8N0V5 402 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 ZNF786Q8N393 782 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 RPRMLQ8N4K4 120 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 FAM26EQ8N5C1 309 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 OR6N1Q8NGY5 312 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 TMEM45BQ96B21 275 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 INTS12Q96CB8 462 aaKnown RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 SLC25A44Q96H78 314 aaPredicted RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 GMPPAQ96IJ6 420 aaPredicted RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 Q96MT0 163 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 ZNF582Q96NG8 517 aaPredicted RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 OR2M2Q96R28 347 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 TM9SF2Q99805 663 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 HCAR1Q9BXC0 346 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 SYT4Q9H2B2 425 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 C12orf49Q9H741 205 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 RNF122Q9H9V4 155 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 BCO1Q9HAY6 547 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 SRA1Q9HD15 236 aaKnown RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 TINAGQ9UJW2 476 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 ZNF835Q9Y2P0 537 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 FAM215AQ9Y5M1 114 aa9.26□□□□□ -0.93
TPM1-221ENST00000559831 INTS1Q8N201 2190 aaKnown RBP9.26□□□□□ -0.93
TPM1-221ENST00000559831 TRGV8A0A0C4DH27 118 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 SLC22A23A1A5C7 686 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 FAM171A2A8MVW0 826 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 M0R3G1 203 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 FAM20BO75063 409 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 WBP4O75554 376 aaKnown RBP9.25□□□□□ -0.93
TPM1-221ENST00000559831 HOXD4P09016 255 aaPredicted RBP9.25□□□□□ -0.93
TPM1-221ENST00000559831 PGA4P0DJD7 388 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 PGA3P0DJD8 388 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 CLUP10909 449 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 AGTR1P30556 359 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 PYCR1P32322 319 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 NTF4P34130 210 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 CASP6P55212 293 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 CDH11P55287 796 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 EFNB1P98172 346 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 FMODQ06828 376 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 LGALS3BPQ08380 585 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 APOFQ13790 326 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 OCLNQ16625 522 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 SMN1Q16637 294 aaKnown RBP9.25□□□□□ -0.93
TPM1-221ENST00000559831 C6orf141Q5SZD1 244 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 MEDAGQ5VYS4 303 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 OR2A2Q6IF42 318 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 B3GNT6Q6ZMB0 384 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 NUFIP2Q7Z417 695 aaKnown RBP9.25□□□□□ -0.93
TPM1-221ENST00000559831 GID4Q8IVV7 300 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 ZNF100Q8IYN0 542 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 TMEM123Q8N131 208 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 GPR137CQ8N3F9 429 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 CNEP1R1Q8N9A8 125 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 PROKR2Q8NFJ6 384 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 BPIFB6Q8NFQ5 453 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 OR51L1Q8NGJ5 315 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 FBLIM1Q8WUP2 373 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 NSMAFQ92636 917 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 TSSK2Q96PF2 358 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 RBP7Q96R05 134 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 DDOQ99489 341 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 ALG12Q9BV10 488 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 AMBNQ9NP70 447 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 GLRX2Q9NS18 164 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 PARPBPQ9NWS1 579 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 ASB6Q9NWX5 421 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 VSX1Q9NZR4 365 aaPredicted RBP9.25□□□□□ -0.93
TPM1-221ENST00000559831 RCE1Q9Y256 329 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 EMC9Q9Y3B6 208 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 BSNQ9UPA5 3926 aa9.25□□□□□ -0.93
TPM1-221ENST00000559831 MBD3L4A6NDZ8 208 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 MBD3L3A6NE82 208 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 MBD3L5A6NJ08 208 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 SNTNA6NMZ2 147 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 SLC1A7O00341 560 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 PRODHO43272 600 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 XPNPEP2O43895 674 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 SLC16A7O60669 478 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 SS18L1O75177 396 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 KRT33AO76009 404 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 ZNF432O94892 652 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 IGHV3-9P01782 118 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 PRB1P04280 392 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms