RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 BCL2L2Q92843 193 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 RSRC1Q96IZ7 334 aaKnown RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 NDEL1Q9GZM8 345 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 TXNIPQ9H3M7 391 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 NPAP1Q9NZP6 1156 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 STX18Q9P2W9 335 aaKnown RBP10.83□□□□□ -0.68
SMAD3-205ENST00000558428 POFUT2Q9Y2G5 429 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 LYVE1Q9Y5Y7 322 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 PLCE1Q9P212 2302 aa10.83□□□□□ -0.68
SMAD3-205ENST00000558428 DSCAMO60469 2012 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 UNC119BA6NIH7 251 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 NPIPB13A6NJU9 1138 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF99A8MXY4 864 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 NPIPB4C9JG80 1138 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 TRMUO75648 421 aaKnown RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 SEC14L2O76054 403 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 WNT11O96014 354 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 IGHMP01871 453 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ACADSP16219 412 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 IFNGR2P38484 337 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ERFP50548 548 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF83P51522 516 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 HMGA2P52926 109 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 UBE2NP61088 152 aaKnown RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 RPL27P61353 136 aaKnown RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 RUNX1T1Q06455 604 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 PPP1R8Q12972 351 aaKnown RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 TAF11Q15544 211 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 NCMAPQ5T1S8 102 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ARMC4Q5T2S8 1044 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 OR2T5Q6IEZ7 315 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF704Q6ZNC4 412 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ZER1Q7Z7L7 766 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 CDH24Q86UP0 819 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 OR2T29Q8NH02 315 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 MAGEE2Q8TD90 523 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 GPA33Q99795 319 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 CHID1Q9BWS9 393 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 C1QTNF6Q9BXI9 259 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 LRMDAQ9H2I8 198 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 MMADHCQ9H3L0 296 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 NELFAQ9H3P2 528 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 LIME1Q9H400 295 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 PLEKHF2Q9H8W4 249 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 OBP2BQ9NPH6 170 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF346Q9UL40 294 aaKnown RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 SIGLEC7Q9Y286 467 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 MAGED1Q9Y5V3 778 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-205ENST00000558428 PDZD2O15018 2839 aa10.82□□□□□ -0.68
SMAD3-205ENST00000558428 TCRBV3S1A0A5B6 114 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 M0R1B8 84 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 PTP4A3O75365 173 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 NDUFB2O95178 105 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 PLAUP00749 431 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 CST1P01037 141 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 CD3EP07766 207 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 QDPRP09417 244 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF26P17031 533 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-205ENST00000558428 ACVR1BP36896 505 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 ERVK-25P63136 954 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 TUBA1BP68363 451 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 TUBA4AP68366 448 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 MYBPC1Q00872 1141 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 BSPH1Q075Z2 132 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 CD47Q08722 323 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 C1QTNF12Q5T7M4 302 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 KLHL17Q6TDP4 642 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 TMEM108Q6UXF1 575 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 ZNF813Q6ZN06 617 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 TUBA1AQ71U36 451 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 LINC00471Q8N535 108 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 SYT14Q8NB59 555 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 OR9Q2Q8NGE9 314 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 OR4C15Q8NGM1 316 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 FANK1Q8TC84 345 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 GNPDA2Q8TDQ7 276 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 HDAC2Q92769 488 aaKnown RBP10.81□□□□□ -0.68
SMAD3-205ENST00000558428 MCHR2Q969V1 340 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 TSPAN32Q96QS1 320 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 FOXB1Q99853 325 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 KATNB1Q9BVA0 655 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 MRPL13Q9BYD1 178 aaKnown RBP10.81□□□□□ -0.68
SMAD3-205ENST00000558428 REEP1Q9H902 201 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 UBTD1Q9HAC8 227 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 SAMHD1Q9Y3Z3 626 aaKnown RBP10.81□□□□□ -0.68
SMAD3-205ENST00000558428 RNF115Q9Y4L5 304 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 U3KQV3 271 aa10.81□□□□□ -0.68
SMAD3-205ENST00000558428 ARPC4-TTLL3A0A0A6YYG9 625 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 EBAG9O00559 213 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 GNGT2O14610 69 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 DHHO43323 396 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 CCNB2O95067 398 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 CD14P08571 375 aa10.8□□□□□ -0.68
SMAD3-205ENST00000558428 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms