RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TSPAN11A1L157 253 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 FAM220BPB1ANY3 271 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 K7ENP7 123 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 PLPP1O14494 284 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 PRMT5O14744 637 aaPredicted RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 SEMA4FO95754 770 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 LSM8O95777 96 aaKnown RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZSCAN5DPP0CG00 497 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 IGHV1-2P23083 117 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 IL32P24001 234 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 IVDP26440 423 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 HTR2CP28335 458 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 OR1E1P30953 314 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 PCK1P35558 622 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 NBL1P41271 181 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 GSK3BP49841 420 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 SLC26A2P50443 739 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 UGT2B15P54855 530 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 DLX5P56178 289 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ATP6V0D1P61421 351 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 LMO4P61968 165 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ACTA2P62736 377 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ACTG2P63267 376 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 UBE2IP63279 158 aaKnown RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 ACTC1P68032 377 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ACTA1P68133 377 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 CSNK1G2P78368 415 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 FAM182AQ5T1J6 154 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 TIGD3Q6B0B8 471 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZNF470Q6ECI4 717 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ADNP2Q6IQ32 1131 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZNF621Q6ZSS3 439 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 TMEM135Q86UB9 458 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 LHFPL3Q86UP9 236 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 SKA3Q8IX90 412 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 PIANPQ8IYJ0 282 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 SELENOHQ8IZQ5 122 aaKnown RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 PRELID2Q8N945 189 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZNF557Q8N988 423 aaPredicted RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZNF740Q8NDX6 193 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 OR6N2Q8NGY6 317 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZNF564Q8TBZ8 553 aaPredicted RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 ACER1Q8TDN7 264 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 NPRL2Q8WTW4 380 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 PGLYRP4Q96LB8 373 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 MED10Q9BTT4 135 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 SRXN1Q9BYN0 137 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 SELENOIQ9C0D9 397 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZBP1Q9H171 429 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 UPF3AQ9H1J1 476 aaKnown RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 CWH43Q9H720 699 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 ZNF556Q9HAH1 456 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 EML4Q9HC35 981 aaKnown RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 FGF22Q9HCT0 170 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 CD209Q9NNX6 404 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 OR1A1Q9P1Q5 309 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 DPM3Q9P2X0 92 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 RCL1Q9Y2P8 373 aaKnown RBP3.04□□□□□ -1.92
TDP1-217ENST00000557782 V9GYY9 64 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 COL3A1P02461 1466 aaPredicted RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 IGHV3-16A0A0C4DH30 117 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 IDH3BO43837 385 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 MPDU1O75352 247 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 KLHL2O95198 593 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 GJB5O95377 273 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 PLEKHA8P1O95397 391 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 LCA5LO95447 670 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 DUS4LO95620 317 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 FADS2O95864 444 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 CST4P01036 141 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 STSP08842 583 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 NEFHP12036 1026 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ZNF26P17031 533 aaPredicted RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 PSMC3P17980 439 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ATP6V1B2P21281 511 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 VDAC1P21796 283 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ANOS1P23352 680 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 CMA1P23946 247 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 HMGCLP35914 325 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 RFC3P40938 356 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 CLDN6P56747 220 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 SP4Q02446 784 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 SIGLEC14Q08ET2 396 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 PMS2P3Q13401 168 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ZNF585BQ52M93 769 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 KLF17Q5JT82 389 aaPredicted RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 ZNF506Q5JVG8 444 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 OLFML2AQ68BL7 652 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 TFAP2EQ6VUC0 442 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 ZNF571Q7Z3V5 609 aaPredicted RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 CYP4Z1Q86W10 505 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 PPP1R27Q86WC6 154 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 PRR22Q8IZ63 422 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 PUSL1Q8N0Z8 303 aaKnown RBP3.03□□□□□ -1.92
TDP1-217ENST00000557782 C4orf32Q8N8J7 132 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 DNAAF3Q8N9W5 541 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 OR7G1Q8NGA0 311 aa3.03□□□□□ -1.92
TDP1-217ENST00000557782 OR2A12Q8NGT7 310 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms