RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TBPL2Q6SJ96 375 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 WDFY1Q8IWB7 410 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 CCDC36Q8IYA8 594 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-214ENST00000557490 MOSPD2Q8NHP6 518 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 TMEM54Q969K7 222 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 FBXW5Q969U6 566 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-214ENST00000557490 PIP5K1AQ99755 562 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 SMR3AQ99954 134 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 MUC13Q9H3R2 512 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 MOV10Q9HCE1 1003 aaKnown RBP13.87□□□□□ -0.19
TUBB3-214ENST00000557490 GLTPQ9NZD2 209 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 ACTR3BQ9P1U1 418 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 STX18Q9P2W9 335 aaKnown RBP13.87□□□□□ -0.19
TUBB3-214ENST00000557490 PRPF19Q9UMS4 504 aaKnown RBP13.87□□□□□ -0.19
TUBB3-214ENST00000557490 TMEM5Q9Y2B1 443 aa13.87□□□□□ -0.19
TUBB3-214ENST00000557490 SMPD2O60906 423 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 DIRAS1O95057 198 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 TSPAN19P0C672 248 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 SLC9A3P48764 834 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 CDH11P55287 796 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 CLRN1P58418 232 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 LAPTM4AQ15012 233 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 ANKDD1AQ495B1 522 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 ALG10Q5BKT4 473 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 MTX3Q5HYI7 312 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 PODNL1Q6PEZ8 512 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 SLC22A25Q6T423 547 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 CYP2R1Q6VVX0 501 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 BIVMQ86UB2 503 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 OAFQ86UD1 273 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 MEX3DQ86XN8 651 aaKnown RBP13.86□□□□□ -0.19
TUBB3-214ENST00000557490 LILRB1Q8NHL6 650 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-214ENST00000557490 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 TMEM171Q8WVE6 324 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 NEUROG1Q92886 237 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 C1orf21Q9H246 121 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
TUBB3-214ENST00000557490 POU2F3Q9UKI9 436 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 HIF3AQ9Y2N7 669 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
TUBB3-214ENST00000557490 PRR14LQ5THK1 2151 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 CENPBD1B2RD01 187 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 SHISA9B4DS77 424 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 SEC14L2O76054 403 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 PDE5AO76074 875 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 STAMBPO95630 424 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 SEMG1P04279 462 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 FABP3P05413 133 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 GPR4P46093 362 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 CAPZA2P47755 286 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TUBA1BP68363 451 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TUBA4AP68366 448 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 SPIBQ01892 262 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TAF11Q15544 211 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 ZNF813Q6ZN06 617 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TMPRSS11FQ6ZWK6 438 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TUBA1AQ71U36 451 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 DHFR2Q86XF0 187 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 OR52J3Q8NH60 311 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 OR51A7Q8NH64 312 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 ASB10Q8WXI3 467 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 KCNS3Q9BQ31 491 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 NDEL1Q9GZM8 345 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 NELFAQ9H3P2 528 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TAS2R1Q9NYW7 299 aa13.85□□□□□ -0.19
TUBB3-214ENST00000557490 CISD1Q9NZ45 108 aaKnown RBP13.85□□□□□ -0.19
TUBB3-214ENST00000557490 TRAV27A0A087WT01 109 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 NPIPB13A6NJU9 1138 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 NPIPB4C9JG80 1138 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 TMCC2O75069 709 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 ENTPD5O75356 428 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 UBOX5O94941 541 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 PGA4P0DJD7 388 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 PGA3P0DJD8 388 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 ACADSP16219 412 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 ATP6V1B2P21281 511 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 CTXN1P60606 82 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 RPS4XP62701 263 aaKnown RBP13.84□□□□□ -0.19
TUBB3-214ENST00000557490 SPOCK1Q08629 439 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 TOP3AQ13472 1001 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-214ENST00000557490 TRIM25Q14258 630 aaKnown RBP13.84□□□□□ -0.19
TUBB3-214ENST00000557490 FAM169BQ8N8A8 192 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 NOXO1Q8NFA2 376 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 OR13C2Q8NGS9 318 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 SMAP2Q8WU79 429 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-214ENST00000557490 DHRS1Q96LJ7 313 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 SLC38A2Q96QD8 506 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 TNFRSF13CQ96RJ3 184 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 ZNF347Q96SE7 839 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 FOXB1Q99853 325 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 TXNIPQ9H3M7 391 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 CXorf56Q9H5V9 222 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 IL1RAPQ9NPH3 570 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 FAIMQ9NVQ4 179 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 LAMP3Q9UQV4 416 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
TUBB3-214ENST00000557490 TRBV4-1A0A0J9YWV2 114 aa13.83□□□□□ -0.2
TUBB3-214ENST00000557490 DHHO43323 396 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms