RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TP63Q9H3D4 680 aaPredicted RBP9.81□□□□□ -0.84
TMEM260-208ENST00000555905 RNF122Q9H9V4 155 aa9.81□□□□□ -0.84
TMEM260-208ENST00000555905 BCO1Q9HAY6 547 aa9.81□□□□□ -0.84
TMEM260-208ENST00000555905 PARPBPQ9NWS1 579 aa9.81□□□□□ -0.84
TMEM260-208ENST00000555905 RCE1Q9Y256 329 aa9.81□□□□□ -0.84
TMEM260-208ENST00000555905 NOSIPQ9Y314 301 aaKnown RBP9.81□□□□□ -0.84
TMEM260-208ENST00000555905 FLVCR1Q9Y5Y0 555 aa9.81□□□□□ -0.84
TMEM260-208ENST00000555905 SH3D21A4FU49 640 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 OR6C68A6NDL8 312 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 FAM183AA6NL82 134 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 CENPBD1B2RD01 187 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 KDM4EB2RXH2 506 aaPredicted RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 H7C1C5 153 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 SLC43A1O75387 559 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 MRPL33O75394 65 aaKnown RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 TRMUO75648 421 aaKnown RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 GABRB1P18505 474 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 SLC25A1P53007 311 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 CASP6P55212 293 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 LCN6P62502 163 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 CSNK2BP67870 215 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 LGALS3BPQ08380 585 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 CAMK2DQ13557 499 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 TMEM201Q5SNT2 666 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 C6orf141Q5SZD1 244 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 NXNL2Q5VZ03 156 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 CARD17Q5XLA6 110 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 NIPAL3Q6P499 406 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 TUSC5Q8IXB3 177 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 ZNF786Q8N393 782 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 SYT14Q8NB59 555 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 NOXO1Q8NFA2 376 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 OR2T4Q8NH00 348 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 FNDC8Q8TC99 324 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 APH1BQ8WW43 257 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 HDAC2Q92769 488 aaKnown RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 TMEM45BQ96B21 275 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 ZNF582Q96NG8 517 aaPredicted RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 RBP7Q96R05 134 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 OR2M2Q96R28 347 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 HINT3Q9NQE9 182 aaKnown RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 RPRD1BQ9NQG5 326 aaKnown RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 UBAP1Q9NZ09 502 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 DNAJC27Q9NZQ0 273 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 VSX1Q9NZR4 365 aaPredicted RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 AASSQ9UDR5 926 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 ING1Q9UK53 422 aaPredicted RBP9.8□□□□□ -0.84
TMEM260-208ENST00000555905 ZNF835Q9Y2P0 537 aa9.8□□□□□ -0.84
TMEM260-208ENST00000555905 ARHGAP21Q5T5U3 1957 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 SLC22A23A1A5C7 686 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 PRODHO43272 600 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 SS18L1O75177 396 aaPredicted RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 ENTPD6O75354 484 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 WBP4O75554 376 aaKnown RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 PGA4P0DJD7 388 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 PGA3P0DJD8 388 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 CRABP1P29762 137 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 FMO3P31513 532 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 CSNK1A1P48729 337 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 PER3P56645 1201 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 RPS7P62081 194 aaKnown RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 RUNX1T1Q06455 604 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 EIF2S3LQ2VIR3 472 aaKnown RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 KLHL12Q53G59 568 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 RBM48Q5RL73 367 aaKnown RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 THEM4Q5T1C6 240 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 AADACL4Q5VUY2 407 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 DNM1P34Q6PK57 102 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 B3GNT6Q6ZMB0 384 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 DOLPP1Q86YN1 238 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 TMEM123Q8N131 208 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 C9orf106Q8NAJ2 232 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 PROKR2Q8NFJ6 384 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 OR9Q1Q8NGQ5 310 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 OR6N1Q8NGY5 312 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 PTP4A1Q93096 173 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 INTS12Q96CB8 462 aaKnown RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 MRPL13Q9BYD1 178 aaKnown RBP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 SYT4Q9H2B2 425 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 OR51V1Q9H2C8 321 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 MED20Q9H944 212 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 B3GAT2Q9NPZ5 323 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 ASB6Q9NWX5 421 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 SCN3BQ9NY72 215 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 BLOC1S6Q9UL45 172 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.79□□□□□ -0.84
TMEM260-208ENST00000555905 CLEC4AQ9UMR7 237 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 EMC9Q9Y3B6 208 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 SPTA1P02549 2419 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 CACNA1BQ00975 2339 aa9.79□□□□□ -0.84
TMEM260-208ENST00000555905 ATRXP46100 2492 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MBD3L4A6NDZ8 208 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MBD3L3A6NE82 208 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MBD3L5A6NJ08 208 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 OR6C65A6NJZ3 312 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SLC22A31A6NKX4 558 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SLC16A7O60669 478 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 FAM20BO75063 409 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 KRT33AO76009 404 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms