RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RNFT2Q96EX2 444 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 SH3YL1Q96HL8 342 aaPredicted RBP6.16□□□□□ -1.42
SLIRP-204ENST00000555890 MGLLQ99685 303 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 WDR77Q9BQA1 342 aaPredicted RBP6.16□□□□□ -1.42
SLIRP-204ENST00000555890 DCUN1D5Q9BTE7 237 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 MND1Q9BWT6 205 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 NAA50Q9GZZ1 169 aaKnown RBP6.16□□□□□ -1.42
SLIRP-204ENST00000555890 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 LIN28AQ9H9Z2 209 aaKnown RBP6.16□□□□□ -1.42
SLIRP-204ENST00000555890 KLHL21Q9UJP4 597 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 PADI1Q9ULC6 663 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 DIMT1Q9UNQ2 313 aaKnown RBP6.16□□□□□ -1.42
SLIRP-204ENST00000555890 POLHQ9Y253 713 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 GPR52Q9Y2T5 361 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 SLC6A5Q9Y345 797 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 EXOSC1Q9Y3B2 195 aaKnown RBP6.16□□□□□ -1.42
SLIRP-204ENST00000555890 U3KQE9 123 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 MPDZO75970 2070 aa6.16□□□□□ -1.42
SLIRP-204ENST00000555890 DIDO1Q9BTC0 2240 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 TRAV27A0A087WT01 109 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 CCDC187A0A096LP49 1063 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 A0A1W2PPW3 197 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 K7EM74 188 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 WWP2O00308 870 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SCO2O43819 266 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 AIREO43918 545 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SLC25A12O75746 678 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 STK17BO94768 372 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 PPP1R3DO95685 299 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 PTHP01270 115 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 COX6B1P14854 86 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF3P17036 446 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SERPINB10P48595 397 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 RGS6P49758 472 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 POLR2HP52434 150 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SUMO3P55854 103 aaPredicted RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 ROR2Q01974 943 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 LGALS3BPQ08380 585 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 EIF3IQ13347 325 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 MRPL49Q13405 166 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SPHARQ15513 63 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 CTF1Q16619 201 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 DGUOKQ16854 277 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 BTBD16Q32M84 506 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 PLBD1Q6P4A8 553 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 FAM199XQ6PEV8 388 aaPredicted RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 C5orf46Q6UWT4 87 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SLC16A12Q6ZSM3 486 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 RAB11FIP2Q7L804 512 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 SLC46A3Q7Z3Q1 461 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 BCDIN3DQ7Z5W3 292 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 PSD4Q8NDX1 1056 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 M1APQ8TC57 530 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 DUSP19Q8WTR2 217 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 LIPHQ8WWY8 451 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 NACC2Q96BF6 587 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 C8orf44Q96CB5 159 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 MAP6Q96JE9 813 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 ERMAPQ96PL5 475 aaPredicted RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 JMJD8Q96S16 334 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 DDA1Q9BW61 102 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 ISYNA1Q9NPH2 558 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 NANSQ9NR45 359 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 CMC2Q9NRP2 79 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 FOXJ2Q9P0K8 574 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 MYOTQ9UBF9 498 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 IL20RAQ9UHF4 553 aa6.15□□□□□ -1.42
SLIRP-204ENST00000555890 EXOGQ9Y2C4 368 aaKnown RBP6.15□□□□□ -1.42
SLIRP-204ENST00000555890 TRAV36DV7A0A075B6V5 113 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 IGHV1-45A0A0A0MS14 117 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TMED7-TICAM2A0A0A6YYA0 188 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 NSG1A0A0A6YYJ2 146 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TMEM129A0AVI4 362 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ANKUB1A6NFN9 424 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 CCRL2O00421 344 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TP53I11O14683 189 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 IMPA2O14732 288 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ARPC3O15145 178 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 SLC2A10O95528 541 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 LPLP06858 475 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 RAB40ALP0C0E4 278 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TSPAN19P0C672 248 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ICAM2P13598 275 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 NR4A1P22736 598 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 UGT2B10P36537 528 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TGFBR2P37173 567 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 LIPAP38571 399 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ETV5P41161 510 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 AGFG1P52594 562 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 LGALS4P56470 323 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 WNT4P56705 351 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FBXW4P57775 412 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FOXL2P58012 376 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FXYD6P3P58550 94 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 RPS15P62841 145 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TUBA1BP68363 451 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 MLLT11Q13015 90 aaPredicted RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ITGADQ13349 1161 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 PCOLCEQ15113 449 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms