RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 OR13C2Q8NGS9 318 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 SLC7A13Q8TCU3 470 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 ASB10Q8WXI3 467 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 TRAF4Q9BUZ4 470 aaPredicted RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 MRPL13Q9BYD1 178 aaKnown RBP11.9□□□□□ -0.5
SNX6-203ENST00000555416 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 OBP2BQ9NPH6 170 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 INIPQ9NRY2 104 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 B3GNT2Q9NY97 397 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 GLTPQ9NZD2 209 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 RPS6KA6Q9UK32 745 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 MGAT4BQ9UQ53 548 aa11.9□□□□□ -0.5
SNX6-203ENST00000555416 TRAV27A0A087WT01 109 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 IGKV1D-43A0A0B4J1Z2 117 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 B2RBV5 119 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 BCL10O95999 233 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 PATE4P0C8F1 98 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 PAX1P15863 534 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 GPR4P46093 362 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 RPS4XP62701 263 aaKnown RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 MXRA7P84157 204 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 NAAAQ02083 359 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 SEC23BQ15437 767 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ARMC4Q5T2S8 1044 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 C11orf71Q6IPW1 123 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 PODNL1Q6PEZ8 512 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ZNF813Q6ZN06 617 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 MBOAT2Q6ZWT7 520 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ZNF627Q7L945 461 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 MDP1Q86V88 176 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 OR51A7Q8NH64 312 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ACOT11Q8WXI4 607 aaPredicted RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 ZNF566Q969W8 418 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 GTPBP3Q969Y2 492 aaKnown RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 NSL1Q96IY1 281 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 RADILQ96JH8 1075 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ADAD1Q96M93 576 aaKnown RBP11.89□□□□□ -0.51
SNX6-203ENST00000555416 ZNF75AQ96N20 296 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 TNFRSF13CQ96RJ3 184 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ZNF347Q96SE7 839 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 SEPHS2Q99611 448 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 FOXB1Q99853 325 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 FUZQ9BT04 418 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 POU2F3Q9UKI9 436 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 HIF3AQ9Y2N7 669 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 ATP23Q9Y6H3 246 aa11.89□□□□□ -0.51
SNX6-203ENST00000555416 TRIM64A6NGJ6 449 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 TRIM64BA6NI03 449 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 TRMUO75648 421 aaKnown RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 QDPRP09417 244 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 CBR1P16152 277 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 TTKP33981 857 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 ATP5J2P56134 94 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 PIGFQ07326 219 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 TOP3AQ13472 1001 aaPredicted RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 HIST3H3Q16695 136 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 C1QTNF12Q5T7M4 302 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 C16orf89Q6UX73 402 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 SKA3Q8IX90 412 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 CLDN22Q8N7P3 220 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 HDAC2Q92769 488 aaKnown RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 NMD3Q96D46 503 aaKnown RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 PYURFQ96I23 114 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 DHRS1Q96LJ7 313 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 Q96MF0 132 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 SMR3AQ99954 134 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 DHRS9Q9BPW9 319 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 GSX1Q9H4S2 264 aaPredicted RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 CXorf56Q9H5V9 222 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 B3GAT2Q9NPZ5 323 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 MAGEL2Q9UJ55 1249 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 SAMD4AQ9UPU9 718 aaKnown RBP11.88□□□□□ -0.51
SNX6-203ENST00000555416 POFUT2Q9Y2G5 429 aa11.88□□□□□ -0.51
SNX6-203ENST00000555416 A0A1W2PRG6 482 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 A0A1W2PRQ8 180 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 EFCAB9A8MZ26 197 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 DHHO43323 396 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 IGHV4-39P01824 125 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 H1F0P07305 194 aaKnown RBP11.87□□□□□ -0.51
SNX6-203ENST00000555416 SAGP10523 405 aaPredicted RBP11.87□□□□□ -0.51
SNX6-203ENST00000555416 ACADSP16219 412 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 RHCEP18577 417 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 IFNA8P32881 189 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 CAPZA2P47755 286 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 FABP6P51161 128 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms