RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 KIAA0087Q14695 138 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 SPANXN2Q5MJ10 180 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 LHFPL3Q86UP9 236 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 LIX1Q8N485 282 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 EID2Q8N6I1 236 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 SUMF2Q8NBJ7 301 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 VN1R2Q8NFZ6 395 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 OR7G2Q8NG99 324 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 OR1N2Q8NGR9 330 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 RHEBL1Q8TAI7 183 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 CXorf40AQ8TE69 158 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 PIBF1Q8WXW3 757 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 ELMO1Q92556 727 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 SLC38A4Q969I6 547 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 MCUR1Q96AQ8 359 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 ZNF578Q96N58 590 aaPredicted RBP3.71□□□□□ -1.82
VRK1-205ENST00000555402 ZNF160Q9HCG1 818 aa3.71□□□□□ -1.82
VRK1-205ENST00000555402 SAMSN1Q9NSI8 373 aaKnown RBP3.71□□□□□ -1.82
VRK1-205ENST00000555402 A0A0G2JN53 185 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 DLGAP1O14490 977 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 DNALI1O14645 258 aaPredicted RBP3.7□□□□□ -1.82
VRK1-205ENST00000555402 RAB29O14966 203 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 CDH16O75309 829 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 CSF3P09919 207 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 GALP22466 123 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 C21orf59P57076 290 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 ECH1Q13011 328 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 PSG7Q13046 419 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 LRRC10Q5BKY1 277 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 CTRB2Q6GPI1 263 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 SASS6Q6UVJ0 657 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 GTPBP8Q8N3Z3 284 aaPredicted RBP3.7□□□□□ -1.82
VRK1-205ENST00000555402 MS4A15Q8N5U1 240 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 CCDC148Q8NFR7 591 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 ACER1Q8TDN7 264 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 RDH5Q92781 318 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 SGK3Q96BR1 496 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 C20orf24Q9BUV8 137 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 TMEM185BQ9H7F4 350 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 CCL28Q9NRJ3 127 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 USP47Q96K76 1375 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 NINLQ9Y2I6 1382 aa3.7□□□□□ -1.82
VRK1-205ENST00000555402 H6PDO95479 791 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 CLIC3O95833 236 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 INSP01308 110 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 GKN3PP0CG01 181 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 ZNF43P17038 809 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 EIF2S2P20042 333 aaKnown RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 RRM2P31350 389 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 ANP32AP39687 249 aaKnown RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 TFPI2P48307 235 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 RORCP51449 518 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 CCNHP51946 323 aaPredicted RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 WNT4P56705 351 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 GPX6P59796 221 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 UNC119Q13432 240 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 GPNMBQ14956 572 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 MRPL23Q16540 153 aaKnown RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 ALKBH6Q3KRA9 238 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 ZBED5Q49AG3 693 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 LUZP2Q86TE4 346 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 ZADH2Q8N4Q0 377 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 OR1S2Q8NGQ3 325 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 PANX1Q96RD7 426 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 SLC29A1Q99808 456 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 ECSITQ9BQ95 431 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 DEFB127Q9H1M4 99 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 EML4Q9HC35 981 aaKnown RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 MMP26Q9NRE1 261 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 LSM7Q9UK45 103 aaKnown RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 CFAP45Q9UL16 551 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 PACSIN2Q9UNF0 486 aaPredicted RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 ZNF646O15015 1829 aaPredicted RBP3.69□□□□□ -1.82
VRK1-205ENST00000555402 PDS5BQ9NTI5 1447 aa3.69□□□□□ -1.82
VRK1-205ENST00000555402 LINC00854A0A1B0GVQ3 168 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 ERVV-1B6SEH8 477 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 H3BNH8 94 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 EIF3GO75821 320 aaKnown RBP eCLIP3.68□□□□□ -1.82
VRK1-205ENST00000555402 MOSP00540 346 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 ELK1P19419 428 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 CTRLP40313 264 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 NAA10P41227 235 aaPredicted RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 NSG1P42857 185 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 RFX3P48380 749 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 TMED10P49755 219 aaKnown RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 RPS15P62841 145 aaKnown RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 REG3AQ06141 175 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 DAZ2Q13117 558 aaKnown RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 FZD2Q14332 565 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 RFX4Q33E94 735 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 EIF3MQ7L2H7 374 aaKnown RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 IQCF2Q8IXL9 164 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 FAM71E2Q8N5Q1 922 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 BBOF1Q8ND07 529 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 OR4C5Q8NGB2 326 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 OR4F15Q8NGB8 312 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 OR10G9Q8NGN4 311 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 OR2G3Q8NGZ4 309 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms