RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MYL12AP19105 171 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 HTR2AP28223 471 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OMPP47874 163 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 POLR2HP52434 150 aaKnown RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 CLDN15P56746 228 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RAC1P63000 192 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 IFITM3Q01628 133 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
PSEN1-213ENST00000555386 ACSF3Q4G176 576 aaPredicted RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 C4orf17Q53FE4 359 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 HBMQ6B0K9 141 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RTL6Q6ICC9 239 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ACSM5Q6NUN0 579 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 MBOAT2Q6ZWT7 520 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GRINAQ7Z429 371 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RANBP3LQ86VV4 465 aaPredicted RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 KIF18BQ86Y91 864 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GRAMD2AQ8IUY3 354 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RNF113BQ8IZP6 322 aaKnown RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 IQCF1Q8N6M8 205 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OR52I1Q8NGK6 324 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RFKQ969G6 155 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CCDC120Q96HB5 630 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OR5B2Q96R09 309 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 MCHR1Q99705 422 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GPA33Q99795 319 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 PRRG4Q9BZD6 226 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OR11A1Q9GZK7 315 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 C6orf62Q9GZU0 229 aaPredicted RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 PRDM14Q9GZV8 571 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 SERINC1Q9NRX5 453 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CHCHD3Q9NX63 227 aaKnown RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 IL20Q9NYY1 176 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 TMED7Q9Y3B3 224 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 A0A0J9YW62 118 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ZNF670-ZNF695F2Z2N8 137 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 TPST2O60704 377 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 WDR1O75083 606 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GPX5O75715 221 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 HMGN1P05114 100 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RNF224P0DH78 156 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GABRA1P14867 456 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CPN1P15169 458 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CPEP16870 476 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CXCR1P25024 350 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 SLC1A3P43003 542 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CRYBB2P43320 205 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 PSMD7P51665 324 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 AGFG1P52594 562 aaKnown RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 ZNF136P52737 540 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 PER3P56645 1201 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 WNT4P56705 351 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CARD18P57730 90 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 RPS3AP61247 264 aaKnown RBP8.83□□□□□ -1
PSEN1-213ENST00000555386 SRSF1Q07955 248 aaKnown RBP eCLIP8.83□□□□□ -1
PSEN1-213ENST00000555386 SELENBP1Q13228 472 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OR1Q1Q15612 314 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ZSWIM7Q19AV6 140 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 SPANXN2Q5MJ10 180 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 WBP2NLQ6ICG8 309 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 C3orf33Q6P1S2 294 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GDF7Q7Z4P5 450 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 GGNQ86UU5 652 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ADGRG3Q86Y34 549 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OR10D3Q8NH80 312 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 OR2V1Q8NHB1 315 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 SLC41A3Q96GZ6 507 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 KLHL15Q96M94 604 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 ZNF559Q9BR84 538 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CCDC32Q9BV29 185 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 JAM3Q9BX67 310 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 NUAK2Q9H093 628 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 TMEM27Q9HBJ8 222 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CHRNA9Q9UGM1 479 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 CLEC2DQ9UHP7 191 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 SSR3Q9UNL2 185 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 FAM215AQ9Y5M1 114 aa8.83□□□□□ -1
PSEN1-213ENST00000555386 NCOA6Q14686 2063 aaPredicted RBP8.82□□□□□ -1
PSEN1-213ENST00000555386 IGHV3-15A0A0B4J1V0 119 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 A0A1B0GWA3 101 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 TMEM72A0PK05 275 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ZC3H12DA2A288 527 aaKnown RBP8.82□□□□□ -1
PSEN1-213ENST00000555386 TRAPPC13A5PLN9 417 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ELOA3DA6NLF2 546 aaPredicted RBP8.82□□□□□ -1
PSEN1-213ENST00000555386 AHRRA9YTQ3 701 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 E9PLN8 166 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 LINC01387J3KSC0 135 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 PTTG1O95997 202 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 IL1AP01583 271 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 GLI4P10075 376 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 GAAP10253 952 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ADH6P28332 368 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 APOBEC1P41238 236 aaKnown RBP8.82□□□□□ -1
PSEN1-213ENST00000555386 MTNR1AP48039 350 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 RORCP51449 518 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 TPBGQ13641 420 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 PON3Q15166 354 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ELOA3BQ3SY89 546 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 SLC25A53Q5H9E4 307 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 RPL13AP3Q6NVV1 102 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms