RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 C1orf21Q9H246 121 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 GLTPQ9NZD2 209 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 ACTR3BQ9P1U1 418 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 AURKCQ9UQB9 309 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 HIF3AQ9Y2N7 669 aa10.59□□□□□ -0.71
SRP54-206ENST00000555317 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
SRP54-206ENST00000555317 TRAV27A0A087WT01 109 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 A0A087WUU8 490 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 GYG2O15488 501 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 SEC14L2O76054 403 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 DIRAS1O95057 198 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 PRSS23O95084 383 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 GADD45GO95257 159 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 B4GALT1P15291 398 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 MAKP20794 623 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 ZNF84P51523 738 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 TUBA1BP68363 451 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 TUBA4AP68366 448 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 DNAL1Q4LDG9 190 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 PHYHD1Q5SRE7 291 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 FAM205BPQ63HN1 556 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 PODNL1Q6PEZ8 512 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 TBPL2Q6SJ96 375 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 TUBA1AQ71U36 451 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 MEX3DQ86XN8 651 aaKnown RBP10.58□□□□□ -0.72
SRP54-206ENST00000555317 ZDHHC21Q8IVQ6 265 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 NOXO1Q8NFA2 376 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 OR13C2Q8NGS9 318 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 MOSPD2Q8NHP6 518 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 SLC7A13Q8TCU3 470 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 ASB10Q8WXI3 467 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 GTPBP3Q969Y2 492 aaKnown RBP10.58□□□□□ -0.72
SRP54-206ENST00000555317 BOD1Q96IK1 185 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 FAM46AQ96IP4 442 aaKnown RBP10.58□□□□□ -0.72
SRP54-206ENST00000555317 C7orf34Q96L11 122 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 SLC38A2Q96QD8 506 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 ZNF347Q96SE7 839 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 SEPHS2Q99611 448 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 THTPAQ9BU02 230 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 TXNIPQ9H3M7 391 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 CISD1Q9NZ45 108 aaKnown RBP10.58□□□□□ -0.72
SRP54-206ENST00000555317 TMCC3Q9ULS5 477 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 LAMP3Q9UQV4 416 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 ATP23Q9Y6H3 246 aa10.58□□□□□ -0.72
SRP54-206ENST00000555317 NPIPB13A6NJU9 1138 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 CENPBD1B2RD01 187 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 SHISA9B4DS77 424 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 NPIPB4C9JG80 1138 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 ARHGEF9O43307 516 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 TMCC2O75069 709 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 UBOX5O94941 541 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 FARS2O95363 451 aaKnown RBP10.57□□□□□ -0.72
SRP54-206ENST00000555317 RAB36O95755 333 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 CRYAAP02489 173 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 PGA4P0DJD7 388 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 PGA3P0DJD8 388 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 T-ENOLP0DO92 83 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 CD79AP11912 226 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 ACADSP16219 412 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 ATP6V1B2P21281 511 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 IFNGR2P38484 337 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 CTXN1P60606 82 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 RPS4XP62701 263 aaKnown RBP10.57□□□□□ -0.72
SRP54-206ENST00000555317 SPOCK1Q08629 439 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 CD47Q08722 323 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 NPRL3Q12980 569 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 TRIM25Q14258 630 aaKnown RBP10.57□□□□□ -0.72
SRP54-206ENST00000555317 LAPTM4AQ15012 233 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 FAM98BQ52LJ0 330 aaKnown RBP10.57□□□□□ -0.72
SRP54-206ENST00000555317 SYT14Q8NB59 555 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 OR4K5Q8NGD3 323 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 SMAP2Q8WU79 429 aaPredicted RBP10.57□□□□□ -0.72
SRP54-206ENST00000555317 NEUROG1Q92886 237 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 TMEM54Q969K7 222 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 ASB9Q96DX5 294 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 ZNF837Q96EG3 531 aaPredicted RBP10.57□□□□□ -0.72
SRP54-206ENST00000555317 FOXB1Q99853 325 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 IL1RAPQ9NPH3 570 aa10.57□□□□□ -0.72
SRP54-206ENST00000555317 TRBV4-1A0A0J9YWV2 114 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 A6NIZ1 184 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 XKRYO14609 159 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 DHHO43323 396 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 OR10H3O60404 316 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 UBL3O95164 117 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 SEMG1P04279 462 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 QDPRP09417 244 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 TSPAN19P0C672 248 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 FUT4P22083 530 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 RRM2P31350 389 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 ARR3P36575 388 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 ACVR1BP36896 505 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 GUCA1AP43080 201 aaPredicted RBP10.56□□□□□ -0.72
SRP54-206ENST00000555317 IDH3GP51553 393 aaPredicted RBP10.56□□□□□ -0.72
SRP54-206ENST00000555317 RAP1BP61224 184 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 RPL27P61353 136 aaKnown RBP10.56□□□□□ -0.72
SRP54-206ENST00000555317 RAP1AP62834 184 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 LSM11P83369 360 aaKnown RBP eCLIP10.56□□□□□ -0.72
SRP54-206ENST00000555317 MYBPC1Q00872 1141 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 CHRNB3Q05901 458 aa10.56□□□□□ -0.72
SRP54-206ENST00000555317 GSG1Q2KHT4 349 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms