RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SGTBQ96EQ0 304 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 HOPXQ9BPY8 73 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF442Q9H7R0 627 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 SEC61A2Q9H9S3 476 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 EFCAB1Q9HAE3 211 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 CMTM6Q9NX76 183 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 MED31Q9Y3C7 131 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 A0A1W2PRG6 482 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 HTR3EA5X5Y0 456 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-207ENST00000553290 OR7A10O76100 309 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 UBL3O95164 117 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 HLA-HP01893 362 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 OR4A8P0C604 315 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 B4GALT1P15291 398 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 FUT1P19526 365 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 UGT2B15P54855 530 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 HGFACQ04756 655 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 ST3GAL3Q11203 375 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 VHLLQ6RSH7 139 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 HDDC2Q7Z4H3 204 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF525Q8N782 197 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 LIPHQ8WWY8 451 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 PLK3Q9H4B4 646 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 FBXL3Q9UKT7 428 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 SPEF1Q9Y4P9 236 aa11.23□□□□□ -0.61
ACTN1-207ENST00000553290 CENPBD1B2RD01 187 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 NDUFAB1O14561 156 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 TLX2O43763 284 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-207ENST00000553290 CD5LO43866 347 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 ABCA1O95477 2261 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 RAB36O95755 333 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 IGHG1P01857 330 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 PGA4P0DJD7 388 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 OR8G3PP0DMU2 310 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 NPR2P20594 1047 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 THBS4P35443 961 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 PPOXP50336 477 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
ACTN1-207ENST00000553290 CLRN1P58418 232 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 RAB1AP62820 205 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 LIPEQ05469 1076 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 RPL18Q07020 188 aaKnown RBP11.22□□□□□ -0.61
ACTN1-207ENST00000553290 PIGFQ07326 219 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 DAG1Q14118 895 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 MELKQ14680 651 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 LRFN4Q6PJG9 635 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 HACD2Q6Y1H2 254 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 SPATA21Q7Z572 469 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 PRRC1Q96M27 445 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF75AQ96N20 296 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 SORCS2Q96PQ0 1159 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 NOX3Q9HBY0 568 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 MYOZ1Q9NP98 299 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-207ENST00000553290 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 C20orf141Q9NUB4 165 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF224Q9NZL3 707 aa11.22□□□□□ -0.61
ACTN1-207ENST00000553290 STX18Q9P2W9 335 aaKnown RBP11.22□□□□□ -0.61
ACTN1-207ENST00000553290 A0A096LNT2 108 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 MCIDASD6RGH6 385 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 NDUFS8O00217 210 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 CXCR6O00574 342 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 NME4O00746 187 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 GSTA4O15217 222 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 DHHO43323 396 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 FARS2O95363 451 aaKnown RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 IFNW1P05000 195 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 F13BP05160 661 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 QDPRP09417 244 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 TSPAN19P0C672 248 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF35P13682 527 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF14P17017 642 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 NR4A1P22736 598 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 GIPRP48546 466 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 PTDSS1P48651 473 aaKnown RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 PDLIM4P50479 330 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 SLC7A2P52569 658 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 LOXL1Q08397 574 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 SNTB2Q13425 540 aaKnown RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 C8orf82Q6P1X6 216 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 DPPA2Q7Z7J5 298 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 SKA3Q8IX90 412 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 SLC22A24Q8N4F4 322 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 CMTM5Q96DZ9 223 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 TNFRSF13CQ96RJ3 184 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 VRK1Q99986 396 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 ELAC2Q9BQ52 826 aaKnown RBP11.21□□□□□ -0.61
ACTN1-207ENST00000553290 RAB1BQ9H0U4 201 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 TMEM38BQ9NVV0 291 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 A4GNTQ9UNA3 340 aa11.21□□□□□ -0.61
ACTN1-207ENST00000553290 NPIPB13A6NJU9 1138 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms