RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DNAJC8O75937 253 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 SEC14L2O76054 403 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 PLAUP00749 431 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 TSPAN19P0C672 248 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 NR2C1P13056 603 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 RRM2P31350 389 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 RPL4P36578 427 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 IFNGR2P38484 337 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 RASSF2P50749 326 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 IST1P53990 364 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 CTXN1P60606 82 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 MS4A2Q01362 244 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 TRAP1Q12931 704 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 ZNF813Q6ZN06 617 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 CCDC36Q8IYA8 594 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 DEPDC4Q8N2C3 294 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 NOXO1Q8NFA2 376 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 KBTBD8Q8NFY9 601 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 TMEM54Q969K7 222 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 BOD1Q96IK1 185 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 RADILQ96JH8 1075 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 TNFRSF13CQ96RJ3 184 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 KCNS3Q9BQ31 491 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 TXNIPQ9H3M7 391 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 POU2F3Q9UKI9 436 aa16.17■□□□□ 0.18
PRPF40B-216ENST00000552301 ARPC4-TTLL3A0A0A6YYG9 625 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 TCRBV5S2A0A599 114 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 SH3PXD2BA1X283 911 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 CENPBD1B2RD01 187 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 OR10H3O60404 316 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ATP5HO75947 161 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ATE1O95260 518 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 PGA4P0DJD7 388 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 PGA3P0DJD8 388 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ACADSP16219 412 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 CD40P25942 277 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ART1P52961 327 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 CDH11P55287 796 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 TUBA1BP68363 451 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 TUBA4AP68366 448 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 CD47Q08722 323 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 BNIP1Q12981 228 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 SEC23BQ15437 767 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ZBED5Q49AG3 693 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 IQCCQ4KMZ1 466 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 FAM205BPQ63HN1 556 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 SLC22A25Q6T423 547 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 TUBA1AQ71U36 451 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 PIWIL3Q7Z3Z3 882 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 IGFN1Q86VF2 1251 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 WDFY1Q8IWB7 410 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 NANOS1Q8WY41 292 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 FBXW5Q969U6 566 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 SLC7A6OSQ96CW6 309 aaPredicted RBP16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ZNF837Q96EG3 531 aaPredicted RBP16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 RSRC1Q96IZ7 334 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 ALPK1Q96QP1 1244 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 CCL19Q99731 98 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 FOXB1Q99853 325 aa16.16■□□□□ 0.18
PRPF40B-216ENST00000552301 CDC42EP2O14613 210 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 TRMUO75648 421 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 KRT36O76013 467 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 B4GALT1P15291 398 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 ZNF84P51523 738 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 RPL27P61353 136 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 FLOT2Q14254 428 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 SYT14Q8NB59 555 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 PIGTQ969N2 578 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 NELFAQ9H3P2 528 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 LRBAP50851 2863 aa16.15■□□□□ 0.18
PRPF40B-216ENST00000552301 DSCAMO60469 2012 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 UNC119BA6NIH7 251 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 A6NIZ1 184 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 AQP12BA6NM10 295 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 TNFRSF11BO00300 401 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 DHHO43323 396 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 NDUFB2O95178 105 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 FARS2O95363 451 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 IGHMP01871 453 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 QDPRP09417 244 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 ACVR1BP36896 505 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 MAGEA2P43356 314 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 OMPP47874 163 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 LIMS1P48059 325 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 RAP1BP61224 184 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 RAP1AP62834 184 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 ZNF672Q499Z4 452 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 ARMC4Q5T2S8 1044 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 AQP12AQ8IXF9 295 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 ZNF611Q8N823 705 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 SLC38A2Q96QD8 506 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 ALG12Q9BV10 488 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 KATNB1Q9BVA0 655 aa16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 HEATR1Q9H583 2144 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-216ENST00000552301 XKRYO14609 159 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 ACOT8O14734 319 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 CD14P08571 375 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 RAP2AP10114 183 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 CD79AP11912 226 aa16.13■□□□□ 0.17
PRPF40B-216ENST00000552301 CD53P19397 219 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms