RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SHISA3A0PJX4 238 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 TM4SF5O14894 197 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 RBMS1P29558 406 aaKnown RBP17.65■□□□□ 0.42
SSH1-209ENST00000551165 PSMB10P40306 273 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 SLC3A1Q07837 685 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 TBC1D25Q3MII6 688 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 SLC35D2Q76EJ3 337 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 ZNF248Q8NDW4 579 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 SNX33Q8WV41 574 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 DACH2Q96NX9 599 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 OCEL1Q9H607 264 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 TRIM36Q9NQ86 728 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 VSX1Q9NZR4 365 aaPredicted RBP17.65■□□□□ 0.42
SSH1-209ENST00000551165 GNG8Q9UK08 70 aa17.65■□□□□ 0.42
SSH1-209ENST00000551165 A0A087WZY1 265 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 IGKV1D-43A0A0B4J1Z2 117 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 CBR3O75828 277 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 NEURL1O76050 574 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 CDRT1O95170 752 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 CDONQ4KMG0 1287 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 ASCL5Q7RTU5 278 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 THAP4Q8WY91 577 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 KCNS3Q9BQ31 491 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 C6orf62Q9GZU0 229 aaPredicted RBP17.64■□□□□ 0.41
SSH1-209ENST00000551165 B3GALT5Q9Y2C3 310 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 CEP250Q9BV73 2442 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 A0A087WV48 116 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 IGLV1-36A0A0B4J1U3 117 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 GABRPO00591 440 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 MPZL1O95297 269 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 BMP4P12644 408 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 SDC2P34741 201 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 CENPAP49450 140 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 BDH1Q02338 343 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 DCTN2Q13561 401 aaKnown RBP17.64■□□□□ 0.41
SSH1-209ENST00000551165 SLC16A9Q7RTY1 509 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 GPAT4Q86UL3 456 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 OR6N2Q8NGY6 317 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 PRRX2Q99811 253 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 B3GNT4Q9C0J1 378 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 PPIL3Q9H2H8 161 aaKnown RBP17.64■□□□□ 0.41
SSH1-209ENST00000551165 AKIP1Q9NQ31 210 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 CCDC59Q9P031 241 aaKnown RBP17.64■□□□□ 0.41
SSH1-209ENST00000551165 ST6GALNAC2Q9UJ37 374 aa17.64■□□□□ 0.41
SSH1-209ENST00000551165 A0A1B0GVG6 124 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.63■□□□□ 0.41
SSH1-209ENST00000551165 NPIPA5E9PKD4 350 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 RFC3P40938 356 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 NOVA1P51513 510 aaKnown RBP17.63■□□□□ 0.41
SSH1-209ENST00000551165 CAV3P56539 151 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 MEP1BQ16820 701 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 DPY19L4Q7Z388 723 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 OR13C5Q8NGS8 318 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 AMELYQ99218 206 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 NXF2Q9GZY0 626 aaKnown RBP17.63■□□□□ 0.41
SSH1-209ENST00000551165 QPCTLQ9NXS2 382 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 GALNT8Q9NY28 637 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 NPIPA1Q9UND3 350 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 PCDHGB7Q9Y5F8 929 aa17.63■□□□□ 0.41
SSH1-209ENST00000551165 TRDV1A0A1B0GX56 115 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 SLC35F4A4IF30 521 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 B3GALT5-AS1P59052 145 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 ABHD17BQ5VST6 288 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 TUBA3EQ6PEY2 450 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 PXKQ7Z7A4 578 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 CDC20BQ86Y33 519 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 GPALPP1Q8IXQ4 340 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 RNF166Q96A37 237 aaPredicted RBP17.62■□□□□ 0.41
SSH1-209ENST00000551165 PGLYRP3Q96LB9 341 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 MRPL22Q9NWU5 206 aaKnown RBP17.62■□□□□ 0.41
SSH1-209ENST00000551165 IGHV3-15A0A0B4J1V0 119 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 A6NL46 340 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 SULT2B1O00204 365 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 FZD7O75084 574 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 WDPCPO95876 746 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 HLA-DQA2P01906 255 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 BIDP55957 195 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 ZNF684Q5T5D7 378 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 FAM27D1Q5T7N8 215 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 JMJD6Q6NYC1 403 aaPredicted RBP17.62■□□□□ 0.41
SSH1-209ENST00000551165 TMPPEQ6ZT21 453 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 MFSD4AQ8N468 514 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 SLC25A43Q8WUT9 341 aaPredicted RBP17.62■□□□□ 0.41
SSH1-209ENST00000551165 MIB2Q96AX9 1013 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 ADAD1Q96M93 576 aaKnown RBP17.62■□□□□ 0.41
SSH1-209ENST00000551165 COA3Q9Y2R0 106 aaPredicted RBP17.62■□□□□ 0.41
SSH1-209ENST00000551165 FKBP7Q9Y680 259 aa17.62■□□□□ 0.41
SSH1-209ENST00000551165 A0A1W2PNV4 684 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 PLPP2O43688 288 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 OR8G3PP0DMU2 310 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 WT1P19544 449 aaPredicted RBP17.61■□□□□ 0.41
SSH1-209ENST00000551165 CSRP1P21291 193 aaKnown RBP17.61■□□□□ 0.41
SSH1-209ENST00000551165 FGF9P31371 208 aaPredicted RBP17.61■□□□□ 0.41
SSH1-209ENST00000551165 FOXO1Q12778 655 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 AIMP2Q13155 320 aaKnown RBP17.61■□□□□ 0.41
SSH1-209ENST00000551165 DMKNQ6E0U4 476 aaPredicted RBP17.61■□□□□ 0.41
SSH1-209ENST00000551165 LRRC69Q6ZNQ3 347 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 HSD17B8Q92506 261 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 KCTD7Q96MP8 289 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 KCNK17Q96T54 332 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms