RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TGDSO95455 350 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 GAAP10253 952 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 GPX2P18283 190 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 AHCYP23526 432 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 COL8A2P25067 703 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 ALDH3B1P43353 468 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 CDH12P55289 794 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 SELENOVP59797 346 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 SCARB2Q14108 478 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF613Q6PF04 617 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 LINC00114Q6XXX2 140 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 DPPA2Q7Z7J5 298 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 ARMC8Q8IUR7 673 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 FUNDC1Q8IVP5 155 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 WDFY1Q8IWB7 410 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 C10orf111Q8N326 155 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-221ENST00000550914 OR51F2Q8NH61 342 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 RNF217Q8TC41 542 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 TMEM54Q969K7 222 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 SPDL1Q96EA4 605 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF275Q9NSD4 429 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-221ENST00000550914 GLTPQ9NZD2 209 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 VAPAQ9P0L0 249 aa11.02□□□□□ -0.65
PTCH1-221ENST00000550914 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.65
PTCH1-221ENST00000550914 EVPLLA8MZ36 301 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 FAM157AC9JC47 383 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 CHP2O43745 196 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 RP2O75695 350 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 MFN2O95140 757 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 VENTXO95231 258 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 ADORA3P0DMS8 318 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 OR8G3PP0DMU2 310 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 ANPEPP15144 967 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 CFPP27918 469 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 SEC24CP53992 1094 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 BIDP55957 195 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 LMO4P61968 165 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 ZP4Q12836 540 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 RAB39AQ14964 217 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 MAD2L1BPQ15013 274 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 PCGF3Q3KNV8 242 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 NRN1LQ496H8 165 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 RGS7BPQ6MZT1 257 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 SHQ1Q6PI26 577 aaKnown RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 USP43Q70EL4 1123 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 CARM1Q86X55 608 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF584Q8IVC4 421 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 SKA3Q8IX90 412 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 SLC22A24Q8N4F4 322 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 C10orf53Q8N6V4 93 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 HIPK4Q8NE63 616 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF418Q8TF45 676 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-221ENST00000550914 YIPF5Q969M3 257 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 SLC52A3Q9NQ40 469 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 TCF7L2Q9NQB0 619 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 NKIRAS2Q9NYR9 191 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 SLAMF8Q9P0V8 285 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 DUSP13Q9UII6 198 aa11.01□□□□□ -0.65
PTCH1-221ENST00000550914 IGLV3-9A0A075B6K5 115 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 A0A1W2PPW3 197 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 LRRN3E7EW58 273 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 PPIHO43447 177 aaKnown RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 MGRN1O60291 552 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 NCR1O76036 304 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 OR6A2O95222 327 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 FARS2O95363 451 aaKnown RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 SNAP29O95721 258 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 NAT2P11245 290 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF250P15622 560 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 KLF3P57682 345 aaPredicted RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 PCBP3P57721 371 aaKnown RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 MAGOHP61326 146 aaKnown RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 MYBPC1Q00872 1141 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 RUNX1T1Q06455 604 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 NKPD1Q17RQ9 610 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 PAGE3Q5JUK9 113 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 WDR88Q6ZMY6 472 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 SLC35D2Q76EJ3 337 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 SLC30A7Q8NEW0 376 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 ZNF566Q969W8 418 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 TLCD1Q96CP7 247 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 ZMYND19Q96E35 227 aaPredicted RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 SLC25A44Q96H78 314 aaPredicted RBP11□□□□□ -0.65
PTCH1-221ENST00000550914 LRRC37BQ96QE4 947 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 MCHR1Q99705 422 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 WFDC6Q9BQY6 131 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 SLCO1B3Q9NPD5 702 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 TMEM38BQ9NVV0 291 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 SLCO1C1Q9NYB5 712 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 TREM2Q9NZC2 230 aa11□□□□□ -0.65
PTCH1-221ENST00000550914 ANGPT4Q9Y264 503 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms