RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 IL20RAQ9UHF4 553 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ST6GALNAC2Q9UJ37 374 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 PRPF19Q9UMS4 504 aaKnown RBP9.8□□□□□ -0.84
RAB5B-208ENST00000550283 HIF3AQ9Y2N7 669 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 ADAM18Q9Y3Q7 739 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 CADP27708 2225 aa9.8□□□□□ -0.84
RAB5B-208ENST00000550283 SH3PXD2BA1X283 911 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 SHISA9B4DS77 424 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF587BE7ETH6 402 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 TRMUO75648 421 aaKnown RBP9.79□□□□□ -0.84
RAB5B-208ENST00000550283 KRT36O76013 467 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 IGF2P01344 180 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 PATE4P0C8F1 98 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 PGA4P0DJD7 388 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 PGA3P0DJD8 388 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 RRM2P31350 389 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 MAGEA2P43356 314 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 SPIBQ01892 262 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 TOP3AQ13472 1001 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-208ENST00000550283 RCN1Q15293 331 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 SPATS1Q496A3 300 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 OTPQ5XKR4 325 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 KLHL24Q6TFL4 600 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 PAMR1Q6UXH9 720 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 ZER1Q7Z7L7 766 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 SYT14Q8NB59 555 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 OR4C15Q8NGM1 316 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 OR6X1Q8NH79 312 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 TSPAN32Q96QS1 320 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 MRPL13Q9BYD1 178 aaKnown RBP9.79□□□□□ -0.84
RAB5B-208ENST00000550283 UBTD1Q9HAC8 227 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 NKX1-2Q9UD57 310 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-208ENST00000550283 SLC7A8Q9UHI5 535 aa9.79□□□□□ -0.84
RAB5B-208ENST00000550283 FBN3Q75N90 2809 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 IGHV1-18A0A0C4DH31 117 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 EFCAB9A8MZ26 197 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 H7C1C5 153 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 M0R1B8 84 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 PTP4A3O75365 173 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 KRT33AO76009 404 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 OR6A2O95222 327 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 SLC2A10O95528 541 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 HIST1H2ABP04908 130 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 FABP3P05413 133 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 IGFBP1P08833 259 aaPredicted RBP9.78□□□□□ -0.84
RAB5B-208ENST00000550283 LCN6P62502 163 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 ERVK-25P63136 954 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 HIST3H3Q16695 136 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 TMPRSS11FQ6ZWK6 438 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 HIST3H2AQ7L7L0 130 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 PIWIL3Q7Z3Z3 882 aaKnown RBP9.78□□□□□ -0.84
RAB5B-208ENST00000550283 TMEM179BQ7Z7N9 219 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 KRTAP1-3Q8IUG1 177 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 GPR137CQ8N3F9 429 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
RAB5B-208ENST00000550283 OR9Q2Q8NGE9 314 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF519Q8TB69 540 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 AKAP1Q92667 903 aaKnown RBP eCLIP9.78□□□□□ -0.84
RAB5B-208ENST00000550283 HIST1H2ACQ93077 130 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 SLCO4A1Q96BD0 722 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 ASB9Q96DX5 294 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 BOD1Q96IK1 185 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF75AQ96N20 296 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 INIPQ9NRY2 104 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 GLTPQ9NZD2 209 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 ZNF346Q9UL40 294 aaKnown RBP9.78□□□□□ -0.84
RAB5B-208ENST00000550283 SIGLEC7Q9Y286 467 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 UGT2A1Q9Y4X1 527 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 LYVE1Q9Y5Y7 322 aa9.78□□□□□ -0.84
RAB5B-208ENST00000550283 E7EQL1 145 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 ABCD4O14678 606 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 FKBP6O75344 327 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 GMNNO75496 209 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 GADD45GO95257 159 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 HLA-HP01893 362 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 SCG5P05408 212 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 SOD3P08294 240 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 SAGP10523 405 aaPredicted RBP9.77□□□□□ -0.85
RAB5B-208ENST00000550283 B4GALT1P15291 398 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CD40P25942 277 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CALCRP30988 508 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CDAP32320 146 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CSNK1A1P48729 337 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 SLC9A3P48764 834 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CTXN1P60606 82 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 ACTR3P61158 418 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 ALG10Q5BKT4 473 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 ZNF770Q6IQ21 691 aaPredicted RBP9.77□□□□□ -0.85
RAB5B-208ENST00000550283 HMBOX1Q6NT76 420 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 PGBD2Q6P3X8 592 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 ANKRD16Q6P6B7 361 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 KLHL17Q6TDP4 642 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 FAM122BQ7Z309 247 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 OAFQ86UD1 273 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CYP4Z1Q86W10 505 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 RNF113BQ8IZP6 322 aaKnown RBP9.77□□□□□ -0.85
RAB5B-208ENST00000550283 OR6N1Q8NGY5 312 aa9.77□□□□□ -0.85
RAB5B-208ENST00000550283 CANT1Q8WVQ1 401 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms