RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 NR4A2P43354 598 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 GIPRP48546 466 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 CSNK1A1P48729 337 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ARFIP2P53365 341 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 VLDLRP98155 873 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 EFNB3Q15768 340 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 FAM169BQ8N8A8 192 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ANKK1Q8NFD2 765 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 MOSPD2Q8NHP6 518 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 C10orf82Q8WW14 230 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 LRR1Q96L50 414 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF347Q96SE7 839 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 BPESC1Q9GZL8 116 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 PCDHAC1Q9H158 963 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 NANSQ9NR45 359 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 GLTPQ9NZD2 209 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 IGKV1D-43A0A0B4J1Z2 117 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 B9A039 149 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 BLOC1S5-TXNDC5H3BN57 136 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 RNF13O43567 381 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 MT-ATP6P00846 226 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 PGA4P0DJD7 388 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 PGA3P0DJD8 388 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 UMPSP11172 480 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 SLC25A16P16260 332 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 TCN1P20061 433 aaPredicted RBP13.72□□□□□ -0.21
COX6A1-203ENST00000550009 NPR2P20594 1047 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 USF1P22415 310 aaPredicted RBP13.72□□□□□ -0.21
COX6A1-203ENST00000550009 ARR3P36575 388 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 PDLIM4P50479 330 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 SEC24CP53992 1094 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 DSCR9P59020 149 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 ZP4Q12836 540 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 DAG1Q14118 895 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
COX6A1-203ENST00000550009 GSG1Q2KHT4 349 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 METTL21CQ5VZV1 264 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF627Q7L945 461 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 OR4F15Q8NGB8 312 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 RCN3Q96D15 328 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF317Q96PQ6 595 aaPredicted RBP13.72□□□□□ -0.21
COX6A1-203ENST00000550009 SYT3Q9BQG1 590 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 OR51B6Q9H340 312 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 CMTM6Q9NX76 183 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 SNX13Q9Y5W8 968 aa13.72□□□□□ -0.21
COX6A1-203ENST00000550009 J3KTA2 159 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 ADRA2AP08913 450 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 NR4A1P22736 598 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 AQP2P41181 271 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 YAP1P46937 504 aaKnown RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 RAB1AP62820 205 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 HNRNPA0Q13151 305 aaKnown RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 CYLC2Q14093 348 aaPredicted RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 LAPTM4AQ15012 233 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 TRIP10Q15642 601 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 ALKBH6Q3KRA9 238 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 MMEL1Q495T6 779 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 LRRC23Q53EV4 343 aaPredicted RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 CLDN22Q8N7P3 220 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 SYT14Q8NB59 555 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 OR6X1Q8NH79 312 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 PROX1Q92786 737 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 MSI2Q96DH6 328 aaKnown RBP13.71□□□□□ -0.21
COX6A1-203ENST00000550009 ECSITQ9BQ95 431 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF442Q9H7R0 627 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 RHCGQ9UBD6 479 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 RIMS3Q9UJD0 308 aa13.71□□□□□ -0.21
COX6A1-203ENST00000550009 PDE5AO76074 875 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 OR7A10O76100 309 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 OR6A2O95222 327 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 STAMBPO95630 424 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 QDPRP09417 244 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 IGFBP5P24593 272 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 CDAP32320 146 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 RBMXP38159 391 aaKnown RBP13.7□□□□□ -0.22
COX6A1-203ENST00000550009 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 PPOXP50336 477 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 TAS2R41P59536 307 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 CYBRD1Q53TN4 286 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 C1QTNF12Q5T7M4 302 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 CXXC5Q7LFL8 322 aaKnown RBP13.7□□□□□ -0.22
COX6A1-203ENST00000550009 VTCN1Q7Z7D3 282 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 SLC30A8Q8IWU4 369 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 SLC22A24Q8N4F4 322 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 OR8J3Q8NGG0 315 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 TPD52L3Q96J77 140 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 TSPAN32Q96QS1 320 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 KCNK17Q96T54 332 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 SIKE1Q9BRV8 207 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 CHODLQ9H9P2 273 aa13.7□□□□□ -0.22
COX6A1-203ENST00000550009 TMEM38BQ9NVV0 291 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms