RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 SLCO1C1Q9NYB5 712 aa17.12■□□□□ 0.33
GATC-202ENST00000548171 MRPL39Q9NYK5 338 aaKnown RBP17.12■□□□□ 0.33
GATC-202ENST00000548171 NKIRAS2Q9NYR9 191 aa17.12■□□□□ 0.33
GATC-202ENST00000548171 ZIM2Q9NZV7 527 aa17.12■□□□□ 0.33
GATC-202ENST00000548171 PLPP2O43688 288 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 BGLAPP02818 100 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 NUDT7P0C024 238 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 CRYBB2P43320 205 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 CSNK1A1P48729 337 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 KLF3P57682 345 aaPredicted RBP17.11■□□□□ 0.33
GATC-202ENST00000548171 VSNL1P62760 191 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 ZNF584Q8IVC4 421 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 BPIFB2Q8N4F0 458 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 TMPRSS13Q9BYE2 586 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 SDR39U1Q9NRG7 319 aaPredicted RBP17.11■□□□□ 0.33
GATC-202ENST00000548171 TAAR3PQ9P1P4 343 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 TESQ9UGI8 421 aaKnown RBP17.11■□□□□ 0.33
GATC-202ENST00000548171 PKD1L1Q8TDX9 2849 aa17.11■□□□□ 0.33
GATC-202ENST00000548171 IGLV3-9A0A075B6K5 115 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 CLIC1O00299 241 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 CDC14BO60729 498 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 OR8G3PP0DMU2 310 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 ZNF250P15622 560 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 GATA3P23771 443 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 NCALDP61601 193 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 CCL8P80075 99 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 NXNQ6DKJ4 435 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 DHRS4L2Q6PKH6 230 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 DPPA2Q7Z7J5 298 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 KRT73Q86Y46 540 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 SKA3Q8IX90 412 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 SYNPRQ8TBG9 265 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 SLC6A7Q99884 636 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 SPATA5L1Q9BVQ7 753 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 C1orf198Q9H425 327 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 TMEM27Q9HBJ8 222 aa17.1■□□□□ 0.33
GATC-202ENST00000548171 PLPP3O14495 311 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 DEAF1O75398 565 aaPredicted RBP17.09■□□□□ 0.33
GATC-202ENST00000548171 MT-ATP6P00846 226 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 AHCYP23526 432 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 POLR2JP52435 117 aaKnown RBP17.09■□□□□ 0.33
GATC-202ENST00000548171 MVKQ03426 396 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 MOGQ16653 247 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 SWT1Q5T5J6 900 aaKnown RBP17.09■□□□□ 0.33
GATC-202ENST00000548171 AVPI1Q5T686 147 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 DCAF12L2Q5VW00 463 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 SLC22A24Q8N4F4 322 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 SLC30A7Q8NEW0 376 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 ZNF519Q8TB69 540 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 RNF217Q8TC41 542 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 TIMD4Q96H15 378 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 MAELQ96JY0 434 aaKnown RBP17.09■□□□□ 0.33
GATC-202ENST00000548171 MOGAT1Q96PD6 335 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 TMEM43Q9BTV4 400 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 NTN4Q9HB63 628 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 THAP1Q9NVV9 213 aa17.09■□□□□ 0.33
GATC-202ENST00000548171 A0A0B4J2E0 115 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 IGHV1-69-2A0A0G2JMI3 117 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 A0A1B0GX12 115 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 CLDN25C9JDP6 229 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 FARS2O95363 451 aaKnown RBP17.08■□□□□ 0.32
GATC-202ENST00000548171 CLPTM1O96005 669 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 MT-ND5P03915 603 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 FAM157BP0CG42 384 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 FPR2P25090 351 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 RAD52P43351 418 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 RBBP4Q09028 425 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 FOXL1Q12952 345 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 MPP2Q14168 576 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 ALKBH6Q3KRA9 238 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 SHISA2Q6UWI4 295 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 WDFY1Q8IWB7 410 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 MIER2Q8N344 545 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 C10orf53Q8N6V4 93 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 ZDHHC22Q8N966 263 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 BHLHE22Q8NFJ8 381 aaPredicted RBP17.08■□□□□ 0.32
GATC-202ENST00000548171 OR6X1Q8NH79 312 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 C11orf40Q8WZ69 217 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 TMEM54Q969K7 222 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
GATC-202ENST00000548171 ZNF747Q9BV97 191 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 RSPO3Q9BXY4 272 aaPredicted RBP17.08■□□□□ 0.32
GATC-202ENST00000548171 BCL2L14Q9BZR8 327 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 CDH20Q9HBT6 801 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 KCNK9Q9NPC2 374 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 GLTPQ9NZD2 209 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 ARHGAP32A7KAX9 2087 aa17.08■□□□□ 0.32
GATC-202ENST00000548171 PRORSD1PA6NEY8 169 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 TMPRSS2O15393 492 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 SERPINI2O75830 405 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 SNAP29O95721 258 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 PTHP01270 115 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 IGHV2-5P01817 119 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 PATE4P0C8F1 98 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 BIDP55957 195 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 RGS8P57771 180 aaPredicted RBP17.07■□□□□ 0.32
GATC-202ENST00000548171 HFEQ30201 348 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 REEP3Q6NUK4 255 aa17.07■□□□□ 0.32
GATC-202ENST00000548171 COMTD1Q86VU5 262 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms