RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 STOML3Q8TAV4 291 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 PRSS16Q9NQE7 514 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 MMP26Q9NRE1 261 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 FBXO4Q9UKT5 387 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 MED31Q9Y3C7 131 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 ATG4BQ9Y4P1 393 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 TRAV18A0A075B6X5 111 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 CENPVL1A0A0U1RR11 272 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 A0A1W2PR48 441 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 TSPAN11A1L157 253 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 LILRB5O75023 590 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 MAS1P04201 325 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 ELFN1P0C7U0 828 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 TIMP2P16035 220 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 SDHAP31040 664 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 PRSS3P35030 304 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 SOX2P48431 317 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 CAPZA1P52907 286 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 SRSF4Q08170 494 aaKnown RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 EIPR1Q53HC9 387 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 ARHGAP11AQ6P4F7 1023 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 PARGQ86W56 976 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 SLC16A11Q8NCK7 471 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 OR4K14Q8NGD5 310 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 OR5AP2Q8NGF4 316 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 CDS1Q92903 461 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 C14orf79Q96F83 325 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 ZC3H10Q96K80 434 aaKnown RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 HSPA12BQ96MM6 686 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 TNFRSF13CQ96RJ3 184 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 MEPEQ9NQ76 525 aaPredicted RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 RCC2Q9P258 522 aaKnown RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 USP36Q9P275 1121 aaKnown RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 METTL1Q9UBP6 276 aaKnown RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 CDV3Q9UKY7 258 aaKnown RBP9.76□□□□□ -0.85
NPAS3-205ENST00000547068 ICAM5Q9UMF0 924 aa9.76□□□□□ -0.85
NPAS3-205ENST00000547068 TRANK1O15050 2925 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 DUXAA6NLW8 204 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 TPT1P13693 172 aaKnown RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 PRKXP51817 358 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 EEF1A1P68104 462 aaKnown RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 NTHL1P78549 312 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 PJVKQ0ZLH3 352 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 DHRS2Q13268 280 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 PON3Q15166 354 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 OR7A5Q15622 319 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 AKIRIN2Q53H80 203 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 ANKRD16Q6P6B7 361 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 NDUFAF7Q7L592 441 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF227Q86WZ6 799 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 DCUN1D3Q8IWE4 304 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 SLC35F3Q8IY50 421 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF561Q8N587 486 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 WDSUB1Q8N9V3 476 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 CLEC1AQ8NC01 280 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 OR10R2Q8NGX6 335 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 SGK3Q96BR1 496 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 NRIP2Q9BQI9 281 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 POTEKPQ9BYX7 375 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 DPEP2Q9H4A9 486 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 KLHL31Q9H511 634 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 ACKR4Q9NPB9 350 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 TMEM100Q9NV29 134 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 STEAP1Q9UHE8 339 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 FAM96BQ9Y3D0 163 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 EYSQ5T1H1 3165 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 A0A087WV48 116 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 C17orf113A0A1B0GUU1 675 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 NARSO43776 548 aaKnown RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 CTAG2O75638 210 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 AIFM1O95831 613 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 MELTFP08582 738 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 RD3LP0DJH9 198 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 LAMP2P13473 410 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 SLC6A6P31641 620 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 CCR2P41597 374 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 AIMP2Q13155 320 aaKnown RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 Q499Y3 187 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 FNDC3BQ53EP0 1204 aaKnown RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 PRAMEF17Q5VTA0 474 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 FIP1L1Q6UN15 594 aaKnown RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 IL34Q6ZMJ4 242 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 ABHD13Q7L211 337 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 GABRG1Q8N1C3 465 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 MYLIPQ8WY64 445 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 PIK3IP1Q96FE7 263 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 TMEM41AQ96HV5 264 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 MACROD1Q9BQ69 325 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 SLC25A21Q9BQT8 299 aaPredicted RBP9.75□□□□□ -0.85
NPAS3-205ENST00000547068 LGR4Q9BXB1 951 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 EGLN1Q9GZT9 426 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 TMEM27Q9HBJ8 222 aa9.75□□□□□ -0.85
NPAS3-205ENST00000547068 HEATR5BQ9P2D3 2071 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 A0A1W2PPE3 182 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF729A6NN14 1252 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 KCNAB3O43448 404 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 RPP14O95059 124 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 RAB3DO95716 219 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms