RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SUB1P53999 127 aaKnown RBP eCLIP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 POLR2FP61218 127 aaKnown RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 REG3AQ06141 175 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 PDIA2Q13087 525 aaKnown RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 USH1GQ495M9 461 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 COX19Q49B96 90 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 Q6ZPB1 254 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 SHISA6Q6ZSJ9 500 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 ABHD13Q7L211 337 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 MREGQ8N565 214 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 ACOT4Q8N9L9 421 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 OR52P1PQ8NH57 321 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 LKAAEAR1Q8TD35 194 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 MAGEE2Q8TD90 523 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 RGP1Q92546 391 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 TBC1D31Q96DN5 1066 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 DTNBP1Q96EV8 351 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 WFIKKN1Q96NZ8 548 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 RNF157Q96PX1 679 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 HOXC10Q9NYD6 342 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 ZNRD1Q9P1U0 126 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 EPS15L1Q9UBC2 864 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 CHRNA9Q9UGM1 479 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 SHPKQ9UHJ6 478 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 MEMO1Q9Y316 297 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 ATP6V0A2Q9Y487 856 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 F11RQ9Y624 299 aaKnown RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 A0A1B0GVX0 72 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 A0A1W2PP18 115 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 RPL36A-HNRNPH2H7BZ11 118 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 PEX11AO75192 247 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 CLDN9O95484 217 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 IGKV1D-16P01601 117 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 GAPDHP04406 335 aaKnown RBP1.81□□□□□ -2.12
CCDC38-204ENST00000546816 UGT2B4P06133 528 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 POLR2MP0CAP2 368 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 HSPA5P11021 654 aaKnown RBP1.81□□□□□ -2.12
CCDC38-204ENST00000546816 PAX7P23759 505 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 CYB561P49447 251 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 AQP6Q13520 282 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 PRPSAP1Q14558 356 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF880Q6PDB4 577 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 STRADAQ7RTN6 431 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 BIVMQ86UB2 503 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 TMEM123Q8N131 208 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 TEX9Q8N6V9 391 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 MFSD9Q8NBP5 474 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 FAM83FQ8NEG4 500 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-204ENST00000546816 OR5W2Q8NH69 310 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 UBE2Q2Q8WVN8 375 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 GEMIN6Q8WXD5 167 aaKnown RBP1.81□□□□□ -2.12
CCDC38-204ENST00000546816 THRSPQ92748 146 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 SYAP1Q96A49 352 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-204ENST00000546816 RBM14Q96PK6 669 aaKnown RBP1.81□□□□□ -2.12
CCDC38-204ENST00000546816 TSGA13Q96PP4 275 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 CHAC1Q9BUX1 264 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 MFFQ9GZY8 342 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 HMG20AQ9NP66 347 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 ISYNA1Q9NPH2 558 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF355PQ9NSJ1 428 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 MMP17Q9ULZ9 603 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 KCNIP3Q9Y2W7 256 aa1.81□□□□□ -2.12
CCDC38-204ENST00000546816 IGLV1-50A0A075B6I6 118 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 IGHV5-10-1A0A0J9YXX1 117 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 C7orf66A4D0T2 115 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 METTL21EPA6NDL7 271 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 GOLGA8SH3BPF8 625 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 MAGEB3O15480 346 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 SLC25A14O95258 325 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-204ENST00000546816 IQCF3P0C7M6 154 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 CNR1P21554 472 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 HMGB2P26583 209 aaKnown RBP1.8□□□□□ -2.12
CCDC38-204ENST00000546816 GSSP48637 474 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 ESRRGP62508 458 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 SLC7A9P82251 487 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 MEF2BQ02080 365 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-204ENST00000546816 ELP6Q0PNE2 266 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 SCRN3Q0VDG4 424 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 ERCC8Q13216 396 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 EXOC3L2Q2M3D2 409 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 DMRTC1Q5HYR2 192 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 OR4F3Q6IEY1 312 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 TMEM179Q6ZVK1 233 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 THOC6Q86W42 341 aaKnown RBP1.8□□□□□ -2.12
CCDC38-204ENST00000546816 OR2T34Q8NGX1 318 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 OR10C1Q96KK4 312 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 FAIM2Q9BWQ8 316 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 RAB33BQ9H082 229 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 AZI2Q9H6S1 392 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 RMND5AQ9H871 391 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 SLCO1B3Q9NPD5 702 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 TMOD2Q9NZR1 351 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 AP1M2Q9Y6Q5 423 aa1.8□□□□□ -2.12
CCDC38-204ENST00000546816 CENPJQ9HC77 1338 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-204ENST00000546816 IGHV3-74A0A0B4J1X5 117 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 A0A1B0GVI7 797 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 K7EQM0 130 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 RRP8O43159 456 aaKnown RBP1.79□□□□□ -2.12
CCDC38-204ENST00000546816 GUCA1CO95843 209 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms