RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TRIM36Q9NQ86 728 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 MYEF2Q9P2K5 600 aaKnown RBP10.74□□□□□ -0.69
CCDC38-202ENST00000546386 FARSAQ9Y285 508 aaKnown RBP10.74□□□□□ -0.69
CCDC38-202ENST00000546386 NCKAP5O14513 1909 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 OCM2P0CE71 109 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 OCMP0CE72 109 aaPredicted RBP10.74□□□□□ -0.69
CCDC38-202ENST00000546386 ENPP1P22413 925 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 CD40LGP29965 261 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 BIDP55957 195 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 PRSS12P56730 875 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 TUBA1BP68363 451 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 SRYQ05066 204 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 PLPPR5Q32ZL2 321 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 TMEM225Q6GV28 225 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 TUBA1AQ71U36 451 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 GLCCI1Q86VQ1 547 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 IZUMO1Q8IYV9 350 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 POC5Q8NA72 575 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 SLC22A8Q8TCC7 542 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 THAP4Q8WY91 577 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 GCDHQ92947 438 aaPredicted RBP10.74□□□□□ -0.69
CCDC38-202ENST00000546386 MMP27Q9H306 513 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 PROK2Q9HC23 129 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 STMN3Q9NZ72 180 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 ZNF229Q9UJW7 825 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 FBXL3Q9UKT7 428 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 SLC22A13Q9Y226 551 aa10.74□□□□□ -0.69
CCDC38-202ENST00000546386 MRPS7Q9Y2R9 242 aaKnown RBP10.74□□□□□ -0.69
CCDC38-202ENST00000546386 A0A1W2PQD3 144 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 PINLYPA6NC86 204 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ZFPL1O95159 310 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ANOS1P23352 680 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 DPP4P27487 766 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 APEX1P27695 318 aaKnown RBP10.73□□□□□ -0.69
CCDC38-202ENST00000546386 GDI2P50395 445 aaKnown RBP10.73□□□□□ -0.69
CCDC38-202ENST00000546386 CLDN20P56880 219 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ADAM8P78325 824 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 PUDPQ08623 228 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SPANXN2Q5MJ10 180 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 LIPNQ5VXI9 398 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 FAM131AQ6UXB0 335 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ZNF517Q6ZMY9 492 aaPredicted RBP10.73□□□□□ -0.69
CCDC38-202ENST00000546386 DBX2Q6ZNG2 339 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 DCDC5Q6ZRR9 648 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 BEST3Q8N1M1 668 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SLC25A46Q96AG3 418 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 PGLYRP3Q96LB9 341 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 MIXL1Q9H2W2 232 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 DEPPQ9NTK1 212 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SLCO1C1Q9NYB5 712 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 METRNQ9UJH8 293 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 EXPH5Q8NEV8 1989 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ANKUB1A6NFN9 424 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 TTC36A6NLP5 189 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 NPIPB7O75200 414 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 IGHV3-9P01782 118 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 CELA3AP09093 270 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ITGA3P26006 1051 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 UGT2B10P36537 528 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SSR4P51571 173 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SIRPAP78324 504 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 EFR3AQ14156 821 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 NTRK2Q16620 822 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 RGS21Q2M5E4 152 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 TRIM16LQ309B1 348 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 STPG1Q5TH74 334 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SERPINA12Q8IW75 414 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SUMF1Q8NBK3 374 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 SDHCQ99643 169 aaPredicted RBP10.73□□□□□ -0.69
CCDC38-202ENST00000546386 STRADBQ9C0K7 418 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 RNF32Q9H0A6 362 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 CENPMQ9NSP4 180 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 MRM2Q9UI43 246 aaKnown RBP10.73□□□□□ -0.69
CCDC38-202ENST00000546386 ATRXP46100 2492 aa10.73□□□□□ -0.69
CCDC38-202ENST00000546386 PRSS37A4D1T9 235 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 TNFSF11O14788 317 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 ARPC3O15145 178 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 GLCEO94923 617 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 HLA-DPB1P04440 258 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 SLC2A1P11166 492 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 PTHLHP12272 177 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 RPL27P61353 136 aaKnown RBP10.72□□□□□ -0.69
CCDC38-202ENST00000546386 CDCP2Q5VXM1 449 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 NDUFAF7Q7L592 441 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 OR2M3Q8NG83 312 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 OR52N1Q8NH53 320 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 DERL3Q96Q80 235 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 NMNAT2Q9BZQ4 307 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 SLC19A3Q9BZV2 496 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 MRPL22Q9NWU5 206 aaKnown RBP10.72□□□□□ -0.69
CCDC38-202ENST00000546386 GSTK1Q9Y2Q3 226 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 CSAG2Q9Y5P2 127 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 FTCDNL1E5RQL4 147 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 NPIPA5E9PKD4 350 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 TFECO14948 347 aaPredicted RBP10.72□□□□□ -0.69
CCDC38-202ENST00000546386 GP1BAP07359 652 aa10.72□□□□□ -0.69
CCDC38-202ENST00000546386 ZNF806P0C7X5 589 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms