RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CLEC18AA5D8T8 446 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ARRDC5A6NEK1 342 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FAM90A27PA6NNH2 459 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF724A8MTY0 619 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 EFCAB9A8MZ26 197 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 EEF1E1-BLOC1S5C9J1V9 151 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 H3BNX3 289 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 GNGT2O14610 69 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CDC42EP2O14613 210 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 GPR171O14626 319 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 DVL2O14641 736 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CLOCKO15516 846 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 EEF1E1O43324 174 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 HNRNPRO43390 633 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 TRAF3IP2O43734 574 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 RRP9O43818 475 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SERPINI2O75830 405 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CCNB2O95067 398 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 VAMP5O95183 116 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 IL18BPO95998 194 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 HPRP00739 348 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 RNF224P0DH78 156 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ADORA3P0DMS8 318 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FUT1P19526 365 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 MAKP20794 623 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FPR3P25089 353 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FASP25445 335 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CTSSP25774 331 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 UQCRC1P31930 480 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 OPRM1P35372 400 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 IFNGR2P38484 337 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 OMPP47874 163 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SLC9A3P48764 834 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SMSP52788 366 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 HMGA2P52926 109 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 IST1P53990 364 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SLURP1P55000 103 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 IL1RL1Q01638 556 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 POU3F1Q03052 451 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 LTBQ06643 244 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 RPL18Q07020 188 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FOXF2Q12947 444 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 PPP1R8Q12972 351 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SLC17A1Q14916 467 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 PDK3Q15120 406 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 PRR14LQ5THK1 2151 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 EEF1A1P5Q5VTE0 462 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 PGBD2Q6P3X8 592 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 VWA1Q6PCB0 445 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CLEC18BQ6UXF7 455 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CASP12Q6UXS9 341 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF771Q7L3S4 317 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 OAFQ86UD1 273 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ABCA12Q86UK0 2595 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 HRNRQ86YZ3 2850 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 UEVLDQ8IX04 471 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 TUSC5Q8IXB3 177 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF808Q8N4W9 903 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 LINC00471Q8N535 108 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FAM26EQ8N5C1 309 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 LRRC17Q8N6Y2 441 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 AQP11Q8NBQ7 271 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 RELL2Q8NC24 303 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 CLEC18CQ8NCF0 446 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 OR9K2Q8NGE7 335 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 OR6K3Q8NGY3 331 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ITLN2Q8WWU7 325 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 ASB5Q8WWX0 329 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 LIPHQ8WWY8 451 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SDCCAG3Q96C92 435 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 SF3B5Q9BWJ5 86 aaKnown RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 NDEL1Q9GZM8 345 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 KIF17Q9P2E2 1029 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 COA3Q9Y2R0 106 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-211ENST00000546304 FLVCR1Q9Y5Y0 555 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 NBPF19A0A087WUL8 3843 aa5.61□□□□□ -1.51
PRKDC-211ENST00000546304 PLCE1Q9P212 2302 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ABCA4P78363 2273 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 TACC2O95359 2948 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 C11orf98E9PRG8 122 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 PLPP3O14495 311 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 RNF13O43567 381 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 OR6A2O95222 327 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ADAP00813 363 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 HIST1H2ABP04908 130 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 YES1P07947 543 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 TSPAN19P0C672 248 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF23P17027 643 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF43P17038 809 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 AGAP20933 346 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 AHCYP23526 432 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 AQP2P41181 271 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 GSSP48637 474 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 SRSF1Q07955 248 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 C1DQ13901 141 aaKnown RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 MICAQ29983 383 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 SLC25A35Q3KQZ1 300 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ANKDD1AQ495B1 522 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ALG10Q5BKT4 473 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms