RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PCNX3Q9H6A9 2034 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 A0A1W2PNV4 684 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 IRGMA1A4Y4 181 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 MBD3L4A6NDZ8 208 aaPredicted RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 MBD3L3A6NE82 208 aaPredicted RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 TUBAL3A6NHL2 446 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 MBD3L5A6NJ08 208 aaPredicted RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 CD8B2A6NJW9 211 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 SLC22A31A6NKX4 558 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 CLCA1A8K7I4 914 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 FTCDNL1E5RQL4 147 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 TNFAIP8O95379 198 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 IGHMP01871 453 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 BGLAPP02818 100 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 TP53P04637 393 aaPredicted RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 HIST1H2ABP04908 130 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 NAT2P11245 290 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 NR2C1P13056 603 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 IFI30P13284 250 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 FUT1P19526 365 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 GRK5P34947 590 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 AGFG1P52594 562 aaKnown RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 GFRA1P56159 465 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 RAC3P60763 192 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 ISL1P61371 349 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 SLC35A1P78382 337 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 H3F3AP84243 136 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 PDK3Q15120 406 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 PTGES3Q15185 160 aaKnown RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 POU4F3Q15319 338 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 SF3B4Q15427 424 aaKnown RBP eCLIP5.86□□□□□ -1.471e-9■■□□□ 13.4
CDCA3-209ENST00000544610 RBM48Q5RL73 367 aaKnown RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 PDSS1Q5T2R2 415 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 ARMC4Q5T2S8 1044 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 VASNQ6EMK4 673 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 KRT80Q6KB66 452 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 PAQR6Q6TCH4 344 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 TMPPEQ6ZT21 453 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 HIST3H2AQ7L7L0 130 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 SLC46A3Q7Z3Q1 461 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 PXKQ7Z7A4 578 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 HMGN2P46Q86SG4 172 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 ADCK1Q86TW2 530 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 OR5J2Q8NH18 312 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 RHOXF1Q8NHV9 184 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 MBD3L2Q8NHZ7 208 aaPredicted RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 FNDC8Q8TC99 324 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 HDAC2Q92769 488 aaKnown RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 HIST1H2ACQ93077 130 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 JSRP1Q96MG2 331 aaPredicted RBP5.86□□□□□ -1.47
CDCA3-209ENST00000544610 GNRHR2Q96P88 292 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 SMR3AQ99954 134 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 PTDSS2Q9BVG9 487 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 TAPBPLQ9BX59 468 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 ASPNQ9BXN1 380 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 CCNB1IP1Q9NPC3 277 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 NRIP3Q9NQ35 241 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 TIGARQ9NQ88 270 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 CTPS2Q9NRF8 586 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 CMC2Q9NRP2 79 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 DKKL1Q9UK85 242 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 FBXL2Q9UKC9 423 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 GMPPBQ9Y5P6 360 aa5.86□□□□□ -1.47
CDCA3-209ENST00000544610 ABCA2Q9BZC7 2435 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 DNAJC13O75165 2243 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 INTS1Q8N201 2190 aaKnown RBP5.85□□□□□ -1.47
CDCA3-209ENST00000544610 OR2M5A3KFT3 312 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 SLC35F4A4IF30 521 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 LIPT2A6NK58 231 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 B4DXG7 233 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 EEF1E1-BLOC1S5C9J1V9 151 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 H3BN98 237 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 BHLHE40O14503 412 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CDC42EP2O14613 210 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 EEF1E1O43324 174 aaKnown RBP5.85□□□□□ -1.47
CDCA3-209ENST00000544610 TRAPPC6AO75865 159 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 IL18BPO95998 194 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 IFNGP01579 166 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 HRGP04196 525 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 HEXAP06865 529 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CD14P08571 375 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 INHBBP09529 407 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 SAGP10523 405 aaPredicted RBP5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CPN1P15169 458 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CPEP16870 476 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 GABRB1P18505 474 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 HK1P19367 917 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CD53P19397 219 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 MAKP20794 623 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 EPHA1P21709 976 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CTSSP25774 331 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 OPRM1P35372 400 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 IDUAP35475 653 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 PCYT1AP49585 367 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 CHN2P52757 468 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 BLVRAP53004 296 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 B3GALT5-AS1P59052 145 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 GABARAPL2P60520 117 aa5.85□□□□□ -1.47
CDCA3-209ENST00000544610 FOXF1Q12946 379 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms