RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TRIM36Q9NQ86 728 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 SDHAF3Q9NRP4 125 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 B3GAT1Q9P2W7 334 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 COA3Q9Y2R0 106 aaPredicted RBP12.27□□□□□ -0.45
HCFC2-202ENST00000544223 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 IDH3BO43837 385 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 TXNDC12O95881 172 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 LIFP15018 202 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 BIDP55957 195 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 LGALS3BPQ08380 585 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 THAP4Q8WY91 577 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 NKD1Q969G9 470 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 ANGPTL4Q9BY76 406 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 TXNIPQ9H3M7 391 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 SH2D2AQ9NP31 389 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 MRPL39Q9NYK5 338 aaKnown RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 PLEKHB1Q9UF11 243 aaPredicted RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 B9D1Q9UPM9 204 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 A0A1B0GVC2 190 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 SLC22A23A1A5C7 686 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 OR2M5A3KFT3 312 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 A6NIN4 97 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 TERTO14746 1132 aaKnown RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 OR2T1O43869 369 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 SNX4O95219 450 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 RENP00797 406 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 IGF2P01344 180 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 OR2T7P0C7T2 308 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 AZGP1P25311 298 aaKnown RBP12.26□□□□□ -0.45
HCFC2-202ENST00000544223 CLDN20P56880 219 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 HSF1Q00613 529 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 MFAP5Q13361 173 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 TMED1Q13445 227 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 ARMC4Q5T2S8 1044 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 LRRN1Q6UXK5 716 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 OR2T27Q8NH04 317 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 MRGPRX4Q96LA9 322 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 JAM3Q9BX67 310 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 PTGES2Q9H7Z7 377 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 CHST11Q9NPF2 352 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 SERINC1Q9NRX5 453 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 ST6GALNAC2Q9UJ37 374 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 IKZF2Q9UKS7 526 aa12.26□□□□□ -0.45
HCFC2-202ENST00000544223 RELNP78509 3460 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 NPIPA5E9PKD4 350 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 STMND1H3BQB6 276 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 ZNF593O00488 134 aaPredicted RBP12.25□□□□□ -0.45
HCFC2-202ENST00000544223 SEC14L5O43304 696 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 TRAPPC6AO75865 159 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 HPP00738 406 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 EDNRAP25101 427 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 GGTLC2Q14390 218 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 EEF1A1P5Q5VTE0 462 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 C3orf33Q6P1S2 294 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 BORCS5Q969J3 196 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 OR14A2Q96R54 314 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 NKX3-1Q99801 234 aaPredicted RBP12.25□□□□□ -0.45
HCFC2-202ENST00000544223 COL25A1Q9BXS0 654 aaPredicted RBP12.25□□□□□ -0.45
HCFC2-202ENST00000544223 ABCB10Q9NRK6 738 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 C14orf119Q9NWQ9 140 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 MALT1Q9UDY8 824 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 MRM2Q9UI43 246 aaKnown RBP12.25□□□□□ -0.45
HCFC2-202ENST00000544223 DKKL1Q9UK85 242 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 NPIPA1Q9UND3 350 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 IGLV3-32A0A0A0MS00 114 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 A0A0B4J203 849 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 TRBV2A0A0J9YWF9 115 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 TNFSF11O14788 317 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 CELA3AP09093 270 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 SPARCP09486 303 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 SOX6P35712 828 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 CD96P40200 585 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 EIF1AXP47813 144 aaKnown RBP12.25□□□□□ -0.45
HCFC2-202ENST00000544223 SUMO3P55854 103 aaPredicted RBP12.25□□□□□ -0.45
HCFC2-202ENST00000544223 TIGD3Q6B0B8 471 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 PARP16Q8N5Y8 322 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 POMGNT2Q8NAT1 580 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 OR2T4Q8NH00 348 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 MFSD8Q8NHS3 518 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 SLC25A46Q96AG3 418 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 MMP27Q9H306 513 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 B3GAT2Q9NPZ5 323 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 COMMD3Q9UBI1 195 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 LAMP5Q9UJQ1 280 aa12.25□□□□□ -0.45
HCFC2-202ENST00000544223 SULT2B1O00204 365 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 TBX1O43435 398 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 RAB40ALP0C0E4 278 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 APEHP13798 732 aaKnown RBP12.24□□□□□ -0.45
HCFC2-202ENST00000544223 ENPP1P22413 925 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 CDAP32320 146 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 RORCP51449 518 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 WIPI1Q5MNZ9 446 aaPredicted RBP12.24□□□□□ -0.45
HCFC2-202ENST00000544223 DCAF10Q5QP82 559 aa12.24□□□□□ -0.45
HCFC2-202ENST00000544223 LCN1P1Q5VSP4 162 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms