RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	RAB10	P61026	200 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	LMO4	P61968	165 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MZT1	Q08AG7	82 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RASGEF1B	Q0VAM2	473 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	EFNB3	Q15768	340 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	GABRA6	Q16445	453 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	KCNMB1	Q16558	191 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SPATA46	Q5T0L3	261 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CCNYL2	Q5T2Q4	361 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	AADACL4	Q5VUY2	407 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	LIPJ	Q5W064	366 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	FBXW9	Q5XUX1	488 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TTC27	Q6P3X3	843 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	KLC3	Q6P597	504 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RAD9B	Q6WBX8	426 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RHOU	Q7L0Q8	258 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	BPIFB2	Q8N4F0	458 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TEX29	Q8N6K0	151 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DNAAF1	Q8NEP3	725 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR7G2	Q8NG99	324 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR10S1	Q8NGN2	331 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR9A2	Q8NGT5	310 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR51F2	Q8NH61	342 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZFP28	Q8NHY6	868 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ACTRT2	Q8TDY3	377 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TRPC4AP	Q8TEL6	797 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	UBTD2	Q8WUN7	234 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	NEU4	Q8WWR8	484 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	C22orf15	Q8WYQ4	148 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DVL3	Q92997	716 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TM4SF18	Q96CE8	201 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	HRASLS5	Q96KN8	279 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TMEM68	Q96MH6	324 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DUX5	Q96PT3	197 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CCT7	Q99832	543 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TBL1XR1	Q9BZK7	514 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	GSTO2	Q9H4Y5	243 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	NOL11	Q9H8H0	719 aa	Known RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	POPDC3	Q9HBV1	291 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RANGRF	Q9HD47	186 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TNFRSF12A	Q9NP84	129 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CA10	Q9NS85	328 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	HAO2	Q9NYQ3	351 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TAS2R16	Q9NYV7	291 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	KLHL9	Q9P2J3	617 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CRNN	Q9UBG3	495 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OPTC	Q9UBM4	332 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	BAIAP2L1	Q9UHR4	511 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ADAM29	Q9UKF5	820 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PSME2	Q9UL46	239 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RYR2	Q92736	4967 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TMEM129	A0AVI4	362 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DNAJC9-AS1	A6NH13	148 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KIF2A	O00139	706 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PDLIM1	O00151	329 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PSMD9	O00233	223 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF195	O14628	629 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PIN1P1	O15428	100 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SEC31A	O94979	1220 aa	Known RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PRSS23	O95084	383 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IGKV1D-16	P01601	117 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FGG	P02679	453 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TF	P02787	698 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UBTFL6	P0CB48	400 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MMP9	P14780	707 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MATN1	P21941	496 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ELK4	P28324	431 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ETV4	P43268	484 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF75D	P51815	510 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PTTG1IP	P53801	180 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RAC3	P60763	192 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ATP6V0D1	P61421	351 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PHEX	P78562	749 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SPIB	Q01892	262 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC18A2	Q05940	514 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IL13RA2	Q14627	380 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DECR1	Q16698	335 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ERCC6L	Q2NKX8	1250 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZIK1	Q3SY52	487 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KCTD21	Q4G0X4	260 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM90A2P	Q658T7	463 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR7E24	Q6IFN5	339 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LEG1	Q6P5S2	330 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	METAP1D	Q6UB28	335 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CD300LD	Q6UXZ3	194 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	COMMD6	Q7Z4G1	85 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF573	Q86YE8	665 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DDIAS	Q8IXT1	998 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF100	Q8IYN0	542 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BCL6B	Q8N143	479 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	METTL4	Q8N3J2	472 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	STPG3	Q8N7X2	389 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SIGLECL1	Q8N7X8	197 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C11orf44	Q8N8P7	122 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	L3MBTL4	Q8NA19	623 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR4C3	Q8NH37	302 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NANP	Q8TBE9	248 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms