RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SPI1P17947 270 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 ACVR1BP36896 505 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 STARP49675 285 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 ETV1P50549 477 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 P2RY4P51582 365 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 SLC35A1P78382 337 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 GPR107Q5VW38 600 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 PAQR6Q6TCH4 344 aa24.81■■□□□ 1.56
CCM2-218ENST00000541586 RPRD1BQ9NQG5 326 aaKnown RBP24.81■■□□□ 1.56
CCM2-218ENST00000541586 A0A1W2PNV4 684 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 GJE1A6NN92 205 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 NPIPA2E9PIF3 369 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 NPIPA3F8WFD2 350 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 H7C1C5 153 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 J3QRE1 110 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 ARHGEF9O43307 516 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 MYL12AP19105 171 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 SLC25A1P53007 311 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 LCN6P62502 163 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 GFRALQ6UXV0 394 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 PXKQ7Z7A4 578 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 OR51L1Q8NGJ5 315 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 ZNRF4Q8WWF5 429 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 ABTB1Q969K4 478 aaPredicted RBP24.8■■□□□ 1.56
CCM2-218ENST00000541586 KLHL15Q96M94 604 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 OR5M11Q96RB7 305 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 HAO2Q9NYQ3 351 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 SPRR3Q9UBC9 169 aa24.8■■□□□ 1.56
CCM2-218ENST00000541586 ZNF814B7Z6K7 855 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 XKRYO14609 159 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 IGHA1P01876 353 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 GFRA1P56159 465 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 LGALS3BPQ08380 585 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 MELKQ14680 651 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 ZNF367Q7RTV3 350 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 ADCK1Q86TW2 530 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 NANOGP1Q8N7R0 232 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 MND1Q9BWT6 205 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 B3GAT1Q9P2W7 334 aa24.79■■□□□ 1.56
CCM2-218ENST00000541586 LSM2Q9Y333 95 aaKnown RBP24.79■■□□□ 1.56
CCM2-218ENST00000541586 EXOSC1Q9Y3B2 195 aaKnown RBP24.79■■□□□ 1.56
CCM2-218ENST00000541586 A0A0J9YW62 118 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 POU3F1Q03052 451 aaPredicted RBP24.78■■□□□ 1.56
CCM2-218ENST00000541586 TLE1Q04724 770 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 PON3Q15166 354 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 ZNF239Q16600 458 aaKnown RBP24.78■■□□□ 1.56
CCM2-218ENST00000541586 PROKR2Q8NFJ6 384 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 ZMYND19Q96E35 227 aaPredicted RBP24.78■■□□□ 1.56
CCM2-218ENST00000541586 TSSK2Q96PF2 358 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 PLSCR2Q9NRY7 297 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 NPIPB13A6NJU9 1138 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 NPIPB4C9JG80 1138 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 RENP00797 406 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 IFNGR1P15260 489 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 CLDN20P56880 219 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 SRYQ05066 204 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 DOC2BQ14184 412 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 MED22Q15528 200 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 TIGD6Q17RP2 521 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 SLC35D3Q5M8T2 416 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 ADGRL4Q9HBW9 690 aa24.78■■□□□ 1.56
CCM2-218ENST00000541586 CHCHD3Q9NX63 227 aaKnown RBP24.78■■□□□ 1.56
CCM2-218ENST00000541586 RSL24D1Q9UHA3 163 aaKnown RBP24.78■■□□□ 1.56
CCM2-218ENST00000541586 AQP7P3A6NL99 342 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 H0YC42 278 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 TNFSF11O14788 317 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 MYL12BO14950 172 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 MRPL3P09001 348 aaKnown RBP24.77■■□□□ 1.56
CCM2-218ENST00000541586 LIMS3P0CW19 117 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 LIMS4P0CW20 117 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 EDN3P14138 238 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 KLK2P20151 261 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 DAP3P51398 398 aaKnown RBP24.77■■□□□ 1.56
CCM2-218ENST00000541586 LCN1P1Q5VSP4 162 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 SLC35D2Q76EJ3 337 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 GGNQ86UU5 652 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 UBQLNLQ8IYU4 475 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 COG8Q96MW5 612 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 JAM3Q9BX67 310 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 NAA50Q9GZZ1 169 aaKnown RBP24.77■■□□□ 1.56
CCM2-218ENST00000541586 SYT4Q9H2B2 425 aa24.77■■□□□ 1.56
CCM2-218ENST00000541586 FAM208BQ5VWN6 2430 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 CHD6Q8TD26 2715 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 A0A1B0GVC2 190 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 PRSS37A4D1T9 235 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 SBK2P0C263 348 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 POU3F2P20265 443 aaPredicted RBP24.76■■□□□ 1.55
CCM2-218ENST00000541586 CSNK2A1P68400 391 aaPredicted RBP24.76■■□□□ 1.55
CCM2-218ENST00000541586 H3F3AP84243 136 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 POU4F2Q12837 409 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 NHLRC1Q6VVB1 395 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 LHFPL3Q86UP9 236 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 PM20D2Q8IYS1 436 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 ASB10Q8WXI3 467 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 ISOC1Q96CN7 298 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 SNX18Q96RF0 628 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 TIMP4Q99727 224 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 FUNDC2Q9BWH2 189 aa24.76■■□□□ 1.55
CCM2-218ENST00000541586 DCTN6O00399 190 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 AQP7O14520 342 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms