RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ETFDHQ16134 617 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 MEP1BQ16820 701 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 NKPD1Q17RQ9 610 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 NKAIN2Q5VXU1 208 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ESX1Q8N693 406 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 CSNK1A1LQ8N752 337 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 NT5CQ8TCD5 201 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 NKD1Q969G9 470 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 RERGQ96A58 199 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2A7Q96R45 310 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZFYVE21Q9BQ24 234 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 EXO5Q9H790 373 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 EVA1AQ9H8M9 152 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 CGGBP1Q9UFW8 167 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 FARSAQ9Y285 508 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR10H1Q9Y4A9 318 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 F5H5P2 479 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ITGA10O75578 1167 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 APBB3O95704 486 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ECDO95905 644 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 S1PR1P21453 382 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 FCARP24071 287 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 TSFMP43897 325 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 IKZF1Q13422 519 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 C1orf61Q13536 156 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ALKBH1Q13686 389 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 Q499Y3 187 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ELFN2Q5R3F8 820 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 OLFML2AQ68BL7 652 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ASPHD2Q6ICH7 369 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ULK3Q6PHR2 472 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ABHD13Q7L211 337 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 GALNT16Q8N428 558 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 BVESQ8NE79 360 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR4S1Q8NGB4 309 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC2A12Q8TD20 617 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 C3orf49Q96BT1 292 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 KTI12Q96EK9 354 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 MRPS24Q96EL2 167 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 RTN4RQ9BZR6 473 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 MFFQ9GZY8 342 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 POFUT1Q9H488 388 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 FBXL3Q9UKT7 428 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 ERVK-19Q9WJR5 959 aa9.41□□□□□ -0.9
CDC42SE1-207ENST00000540998 CDC14CA4D256 554 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 PRAF2O60831 178 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 RBBP9O75884 186 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF28P17035 718 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 MAOBP27338 520 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 AP3S2P59780 193 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 GK2Q14410 553 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 NR0B2Q15466 257 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC22A6Q4U2R8 563 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF684Q5T5D7 378 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 NUDT18Q6ZVK8 323 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 AVL9Q8NBF6 648 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 TSEN15Q8WW01 171 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 NSMAFQ92636 917 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 RSC1A1Q92681 617 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 CCDC74AQ96AQ1 378 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 RADILQ96JH8 1075 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 HRASLS2Q9NWW9 162 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 STEAP1Q9UHE8 339 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 PFDN2Q9UHV9 154 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 BAIAP2Q9UQB8 552 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 DMDP11532 3685 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 ELOA3DA6NLF2 546 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 A8MXK9 166 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 LMX1BO60663 402 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 CTAG2O75638 210 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 NKX2-2O95096 273 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 HLA-DQA2P01906 255 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 PRKACAP17612 351 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 GGTLC2Q14390 218 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 ELOA3BQ3SY89 546 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 SCGB2B2Q4G0G5 96 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 DMRTC1Q5HYR2 192 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 EXOSC6Q5RKV6 272 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 TSSK4Q6SA08 328 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 JAZF1Q86VZ6 243 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC35F3Q8IY50 421 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 PM20D2Q8IYS1 436 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 ELOA3Q8NG57 546 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 SCARB1Q8WTV0 552 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 PNPLA2Q96AD5 504 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 STACQ99469 402 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 CCDC3Q9BQI4 270 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 NMNAT2Q9BZQ4 307 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 TRIM2Q9C040 744 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 GPN1Q9HCN4 374 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 HRH3Q9Y5N1 445 aa9.4□□□□□ -0.9
CDC42SE1-207ENST00000540998 LINC01553A4QN01 128 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 FITM1A5D6W6 292 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 FOXS1O43638 330 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 SDC3O75056 442 aa9.4□□□□□ -0.91
CDC42SE1-207ENST00000540998 GLCEO94923 617 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms