RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SERPINI2O75830 405 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 OR2T7P0C7T2 308 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 CD46P15529 392 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 FGF9P31371 208 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-204ENST00000540846 FOXK1P85037 733 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 GPR50Q13585 617 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 HYAL4Q2M3T9 481 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 SLC6A19Q695T7 634 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 KLBQ86Z14 1044 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ARIH2OSQ8N7S6 290 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ZFP41Q8N8Y5 198 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 OR4K17Q8NGC6 315 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 OR51L1Q8NGJ5 315 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 OR1J4Q8NGS1 313 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 OR2T27Q8NH04 317 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF417Q8TAU3 575 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF519Q8TB69 540 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 POC1BQ8TC44 478 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ZNRF4Q8WWF5 429 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 S100ZQ8WXG8 99 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 BORCS5Q969J3 196 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 DDIT4LQ96D03 193 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 C5orf34Q96MH7 638 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 SNX18Q96RF0 628 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF587Q96SQ5 575 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-204ENST00000540846 COQ7Q99807 217 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 CDADC1Q9BWV3 514 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 POTEKPQ9BYX7 375 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.19□□□□□ -0.623e-6■□□□□ 8.8
SMAD3-204ENST00000540846 ZNF703Q9H7S9 590 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-204ENST00000540846 ZFP64Q9NPA5 681 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 TRIM36Q9NQ86 728 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 TXNL4BQ9NX01 149 aaKnown RBP11.19□□□□□ -0.62
SMAD3-204ENST00000540846 BABAM2Q9NXR7 383 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 MOKQ9UQ07 419 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 TP53TG5Q9Y2B4 290 aa11.19□□□□□ -0.62
SMAD3-204ENST00000540846 A0A087WZY1 265 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 TRAV17A0A0B4J275 112 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 PNMA8CA0A1B0GUJ8 204 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 TRDV1A0A1B0GX56 115 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 CLDN25C9JDP6 229 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 FAM47E-STBD1D6RA91 191 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 RNF13O43567 381 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ZIC3O60481 467 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 CBR3O75828 277 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 RENP00797 406 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 FAM87AP0C7U9 286 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 GAAP10253 952 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 CELP19835 753 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 GALP22466 123 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 MEOX1P50221 254 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 TAS2R43P59537 309 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 RPL27P61353 136 aaKnown RBP11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ACTA2P62736 377 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ACTG2P63267 376 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 RNFT1Q5M7Z0 435 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 SLC35F2Q8IXU6 374 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 GHDCQ8N2G8 530 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 SYS1Q8N2H4 156 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 MFSD4AQ8N468 514 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ZADH2Q8N4Q0 377 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 TMEM178AQ8NBL3 297 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 OR6K6Q8NGW6 343 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 OR2T4Q8NH00 348 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 DNAJA3Q96EY1 480 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ARL5BQ96KC2 179 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 C4orf36Q96KX1 117 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 TTTY12Q9BZ98 90 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
SMAD3-204ENST00000540846 PTGES2Q9H7Z7 377 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 HMG20AQ9NP66 347 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 PALMDQ9NP74 551 aa11.18□□□□□ -0.62
SMAD3-204ENST00000540846 RPRD1BQ9NQG5 326 aaKnown RBP11.18□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF346Q9UL40 294 aaKnown RBP11.18□□□□□ -0.62
SMAD3-204ENST00000540846 BOKQ9UMX3 212 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-204ENST00000540846 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 LIPT2A6NK58 231 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 SHISA8B8ZZ34 492 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 EFNA2O43921 213 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 SELENOFO60613 162 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 OR6A2O95222 327 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 IL1AP01583 271 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 CD53P19397 219 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 IL11P20809 199 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ADH6P28332 368 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 SRD5A2P31213 254 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 PYCR1P32322 319 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 SOX6P35712 828 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 RFC3P40938 356 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-204ENST00000540846 EIF1P41567 113 aaKnown RBP11.17□□□□□ -0.62
SMAD3-204ENST00000540846 DSCR4P56555 118 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-204ENST00000540846 B3GALT5-AS1P59052 145 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 FABP5Q01469 135 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 HSF2Q03933 536 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ZP4Q12836 540 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms