RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 KIF26BQ2KJY2 2108 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 TMEM150CB9EJG8 249 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 KRT33AO76009 404 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 PNPP00491 289 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 ALDOBP05062 364 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 KIR3DL2P43630 455 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 OR1D5P58170 312 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 TAS2R20P59543 309 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 C2orf68Q2NKX9 166 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 Q499Y3 187 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 FAM198BQ6UWH4 519 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 LANCL3Q6ZV70 420 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 LRRTM1Q86UE6 522 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 FTMTQ8N4E7 242 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 FAM71CQ8NEG0 241 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 OR2G2Q8NGZ5 317 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 PMM1Q92871 262 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 PMEPA1Q969W9 287 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 TCTN2Q96GX1 697 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 OR1F2PQ96R84 312 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 DUSP15Q9H1R2 295 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 MEIKINA0A087WXM9 373 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 PEX14O75381 377 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 HLA-DOBP13765 273 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 BLVRAP53004 296 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 WDR38Q5JTN6 314 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 LUZP2Q86TE4 346 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 CDC20BQ86Y33 519 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 C9orf40Q8IXQ3 194 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 DND1Q8IYX4 353 aaKnown RBP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 OR8S1Q8NH09 359 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 ZMAT3Q9HA38 289 aaKnown RBP12.73□□□□□ -0.37
UBE3B-210ENST00000539599 NOX3Q9HBY0 568 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 KLHL9Q9P2J3 617 aa12.73□□□□□ -0.37
UBE3B-210ENST00000539599 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF749O43361 778 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ITGA10O75578 1167 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 RGS11O94810 467 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 RAF1P04049 648 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ANXA2P07355 339 aaKnown RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 PSMB1P20618 241 aaKnown RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 CCKBRP32239 447 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 SLC35D3Q5M8T2 416 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ASPHD2Q6ICH7 369 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ELMOD2Q8IZ81 293 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 FAM109AQ8N4B1 249 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 OR56B4Q8NH76 319 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF436Q9C0F3 470 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 OR4C45A6NMZ5 311 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 GSTZ1O43708 216 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 SLC22A5O76082 557 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF250P15622 560 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 HSD17B7P56937 341 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 MFGE8Q08431 387 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
UBE3B-210ENST00000539599 CBFBQ13951 182 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 TMEM205Q6UW68 189 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 FCAMRQ8WWV6 532 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 CUTCQ9NTM9 273 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 TAS2R10Q9NYW0 307 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 MGAT4CQ9UBM8 478 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 PLCL2Q9UPR0 1127 aa12.72□□□□□ -0.37
UBE3B-210ENST00000539599 LOC101059948A0A1B0GTJ6 334 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 GPRIN2O60269 458 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 DDAH2O95865 285 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 SPARCP09486 303 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 CSRP2Q16527 193 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 RPS4Y2Q8TD47 263 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
UBE3B-210ENST00000539599 S100A16Q96FQ6 103 aaKnown RBP12.71□□□□□ -0.37
UBE3B-210ENST00000539599 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 GPX7Q96SL4 187 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-210ENST00000539599 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 PDE7BQ9NP56 450 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 CA14Q9ULX7 337 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 COL4A2P08572 1712 aa12.71□□□□□ -0.37
UBE3B-210ENST00000539599 GABARAPH6UMI1 98 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 PYCARD-AS1I3L0S3 204 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 LMX1BO60663 402 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 SLC16A7O60669 478 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 IL33O95760 270 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 OPN1LWP04000 364 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ITGA5P08648 1049 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ALOX5APP20292 161 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 PSMD4P55036 377 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms