RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
CCDC7-209ENST00000539197 CHRNA9Q9UGM1 479 aa2.04□□□□□ -2.08
CCDC7-209ENST00000539197 PACSIN2Q9UNF0 486 aaPredicted RBP2.04□□□□□ -2.08
CCDC7-209ENST00000539197 POLDIP2Q9Y2S7 368 aa2.04□□□□□ -2.08
CCDC7-209ENST00000539197 NID2Q14112 1375 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 MN1Q10571 1320 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-209ENST00000539197 METTL21EPA6NDL7 271 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 ZNF705GA8MUZ8 300 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-209ENST00000539197 PRRG1O14668 218 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 HSD17B6O14756 317 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 UPK3AO75631 287 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 B3GALNT1O75752 331 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 SRP72O76094 671 aaKnown RBP2.03□□□□□ -2.08
CCDC7-209ENST00000539197 CAPN1P07384 714 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 CD86P42081 329 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 GINS1Q14691 196 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 NADK2Q4G0N4 442 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 TRIM69Q86WT6 500 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 RNF157Q96PX1 679 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 RPP21Q9H633 154 aaKnown RBP2.03□□□□□ -2.08
CCDC7-209ENST00000539197 LY9Q9HBG7 655 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 PALMDQ9NP74 551 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 ZNF355PQ9NSJ1 428 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 HPF1Q9NWY4 346 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 ISY1Q9ULR0 285 aaKnown RBP2.03□□□□□ -2.08
CCDC7-209ENST00000539197 UBIAD1Q9Y5Z9 338 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
CCDC7-209ENST00000539197 TMEM14AQ9Y6G1 99 aa2.03□□□□□ -2.08
CCDC7-209ENST00000539197 GOLGA8SH3BPF8 625 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 RBFOX2O43251 390 aaKnown RBP eCLIP2.02□□□□□ -2.09
CCDC7-209ENST00000539197 KRT8P05787 483 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 POLR2MP0CAP2 368 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 PTMSP20962 102 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 SSR1P43307 286 aaKnown RBP2.02□□□□□ -2.09
CCDC7-209ENST00000539197 NAMPTP43490 491 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 GPR6P46095 362 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-209ENST00000539197 CCR8P51685 355 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 SCRN3Q0VDG4 424 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 ABHD13Q7L211 337 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 BIVMQ86UB2 503 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 OR52P1PQ8NH57 321 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 RLN3Q8WXF3 142 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 RGP1Q92546 391 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-209ENST00000539197 SGK3Q96BR1 496 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 C16orf45Q96MC5 204 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-209ENST00000539197 HMG20AQ9NP66 347 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 ADAP2Q9NPF8 381 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 SLC35D1Q9NTN3 355 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 FBN3Q75N90 2809 aa2.02□□□□□ -2.09
CCDC7-209ENST00000539197 PNPLA6Q8IY17 1366 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 A0A0B4J2A0 478 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 KMOO15229 486 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 RRP8O43159 456 aaKnown RBP2.01□□□□□ -2.09
CCDC7-209ENST00000539197 PRKAB2O43741 272 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 RAMP3O60896 148 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 GABARAPO95166 117 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 AK4P27144 223 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-209ENST00000539197 PSMA5P28066 241 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 NCBP2P52298 156 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC7-209ENST00000539197 UGT2B15P54855 530 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 TCP10Q12799 353 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 FILIP1LQ4L180 1135 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 TMEM179Q6ZVK1 233 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 RIMKLAQ8IXN7 391 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 ZNF679Q8IYX0 411 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 FAM133AQ8N9E0 248 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 MFSD9Q8NBP5 474 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 TM4SF18Q96CE8 201 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 TBC1D31Q96DN5 1066 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 RPRD1AQ96P16 312 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-209ENST00000539197 SLC38A2Q96QD8 506 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 ZNF382Q96SR6 550 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 YY1AP1Q9H869 796 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 TMOD2Q9NZR1 351 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 SHPKQ9UHJ6 478 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 SNX6Q9UNH7 406 aa2.01□□□□□ -2.09
CCDC7-209ENST00000539197 CARHSP1Q9Y2V2 147 aaKnown RBP2.01□□□□□ -2.09
CCDC7-209ENST00000539197 TNKS1BP1Q9C0C2 1729 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 MSH6P52701 1360 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 K7EQM0 130 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 ARPC3O15145 178 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 NOL3O60936 208 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 ERLIN2O94905 339 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 FABP3P05413 133 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 IGHV1-8P0DP01 117 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 CALM1P0DP23 149 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 CALM2P0DP24 149 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 CALM3P0DP25 149 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 DBTP11182 482 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 SOX6P35712 828 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 HSD17B2P37059 387 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 CX3CR1P49238 355 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 POLR2FP61218 127 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 RPS21P63220 83 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 SFT2D3Q587I9 215 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 TRIM40Q6P9F5 258 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 ZNF493Q6ZR52 646 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 LINC00173Q6ZV60 143 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 PIANPQ8IYJ0 282 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 CEP112Q8N8E3 955 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms