RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NPTNQ9Y639 398 aa13.21□□□□□ -0.3
CDCA3-207ENST00000538862 SPAARA0A1B0GVQ0 90 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 PRR32B1ATL7 298 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 IDSB3KWA1 339 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 KRT33AO76009 404 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 RAF1P04049 648 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 CLPSP04118 112 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
CDCA3-207ENST00000538862 P2RX3P56373 397 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
CDCA3-207ENST00000538862 ALG10Q5BKT4 473 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 TEX261Q6UWH6 196 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 MED25Q71SY5 747 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 TIGD4Q8IY51 512 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF433Q8N7K0 673 aaPredicted RBP13.2□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF511Q8NB15 262 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 FCAMRQ8WWV6 532 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 ADAD1Q96M93 576 aaKnown RBP13.2□□□□□ -0.3
CDCA3-207ENST00000538862 CITED4Q96RK1 184 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 C12orf10Q9HB07 376 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 MMP25Q9NPA2 562 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 DLL4Q9NR61 685 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 U3KQ87 197 aa13.2□□□□□ -0.3
CDCA3-207ENST00000538862 SSNA1O43805 119 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 UPK3AO75631 287 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 LDOC1O95751 146 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 IL33O95760 270 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 IFNA16P05015 189 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 ASAH2BP0C7U1 165 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 UQCRC1P31930 480 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 NXPH1P58417 271 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CTXN1P60606 82 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SKP2Q13309 424 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 PWWP2BQ6NUJ5 590 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 STAC2Q6ZMT1 411 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 OR52I2Q8NH67 350 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 OR5AK2Q8NH90 309 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 NSMAFQ92636 917 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 ORAI1Q96D31 301 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SORCS2Q96PQ0 1159 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 MAP3K3Q99759 626 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SLC25A18Q9H1K4 315 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 TCF7L1Q9HCS4 588 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 MRM2Q9UI43 246 aaKnown RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 FOXJ3Q9UPW0 622 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 ETV7Q9Y603 341 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 ARID1BQ8NFD5 2236 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 MPDZO75970 2070 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 TRBV5-5A0A0J9YX44 114 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 PSMD9O00233 223 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 TSC22D2O75157 780 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SLC22A5O76082 557 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF432O94892 652 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 HPGDP15428 266 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CSRP1P21291 193 aaKnown RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 NUDT1P36639 197 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 GABRA4P48169 554 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 PTH2RP49190 550 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SCAND1P57086 179 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CD226Q15762 336 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 ESCO2Q56NI9 601 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 LIPNQ5VXI9 398 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 MTFR2Q6P444 385 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SEZ6L2Q6UXD5 910 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 LURAP1LQ8IV03 231 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 NAXDQ8IW45 347 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 OR11G2Q8NGC1 345 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 SYNPRQ8TBG9 265 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 HAVCR1Q96D42 359 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 MMABQ96EY8 250 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-207ENST00000538862 MOGAT1Q96PD6 335 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 HEXA-AS1Q9H8Q6 139 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 OR5V1Q9UGF6 321 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 FBXL3Q9UKT7 428 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 PLCL2Q9UPR0 1127 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 RCE1Q9Y256 329 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
CDCA3-207ENST00000538862 A0A1B0GUH1 482 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 TMEM72A0PK05 275 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 LINC00862A6NCI5 91 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 HSPB2A8KAH6 182 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 B4DGG1 531 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 H0YIG0 161 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 SCDO00767 359 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF264O43296 627 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 GMDSO60547 372 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ABHD16AO95870 558 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms