RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PSMB6P28072 239 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 IGFALSP35858 605 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC6A9P48067 706 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 TAS2R19P59542 299 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 RPS23P62266 143 aaKnown RBP7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 TRA2AQ13595 282 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 GFI1BQ5VTD9 330 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 PWWP2BQ6NUJ5 590 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 ZNF585AQ6P3V2 769 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 ULK3Q6PHR2 472 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 CPOQ8IVL8 374 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 PAQR4Q8N4S7 273 aaPredicted RBP7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 TOP6BLQ8N6T0 577 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 OR5AK3PQ8NH89 298 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 MIB2Q96AX9 1013 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 OR14A2Q96R54 314 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 SMAD5Q99717 465 aaKnown RBP7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 SMOQ99835 787 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 HIST1H2BLQ99880 126 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 CYTL1Q9NRR1 136 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 ETV7Q9Y603 341 aa7.81□□□□□ -1.16
SRGAP1-202ENST00000537556 ZNF705GA8MUZ8 300 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 H7C4K7 107 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SOCS6O14544 535 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CDC14BO60729 498 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC25A14O95258 325 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 HOXC12P31275 282 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 LPAR6P43657 344 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 AFF3P51826 1226 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CCL23P55773 120 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 KCNMB1Q16558 191 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 FBXW9Q5XUX1 488 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SERPINA13PQ6UXR4 307 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 MEPCEQ7L2J0 689 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 VRK2Q86Y07 508 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 BBS1Q8NFJ9 593 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 HPSE2Q8WWQ2 592 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 NTNG2Q96CW9 530 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 C4orf36Q96KX1 117 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TIMP4Q99727 224 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 A4GALTQ9NPC4 353 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 KCNJ16Q9NPI9 418 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 GNG8Q9UK08 70 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 A0A1W2PN81 502 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 EIF1AYO14602 144 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CTNSO60931 367 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 GLSO94925 669 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TXNDC12O95881 172 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 C8GP07360 202 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 PTHLHP12272 177 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SRMP19623 302 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CHRNA7P36544 502 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 EIF1AXP47813 144 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SULT1A2P50226 295 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CHIT1Q13231 466 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 DHRS2Q13268 280 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TUSC3Q13454 348 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 EIF4EBP2Q13542 120 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 ARHGAP19Q14CB8 494 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 PGGHGQ32M88 737 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CHRFAM7AQ494W8 412 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 GXYLT1Q4G148 440 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 DACT2Q5SW24 774 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 BHLHA9Q7RTU4 235 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 APCDD1Q8J025 514 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 OR4K14Q8NGD5 310 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CD300LFQ8TDQ1 290 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC38A5Q8WUX1 472 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TMEM19Q96HH6 336 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 STACQ99469 402 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SRMSQ9H3Y6 488 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SH3BGRL2Q9UJC5 107 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 PITPNC1Q9UKF7 332 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 HS3ST4Q9Y661 456 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SLCO1B1Q9Y6L6 691 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 COL5A3P25940 1745 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CKAP5Q14008 2032 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 CDHR4A6H8M9 788 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SIAH2O43255 324 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TCF21O43680 179 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 KDELR3O43731 214 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 NXPH2O95156 264 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TSPAN15O95858 294 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 ZNF888P0CJ79 500 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TBPP20226 339 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 PYCR1P32322 319 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 IDH3GP51553 393 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SSBP1Q04837 148 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 RPS26P11Q5JNZ5 115 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 STEAP1BQ6NZ63 245 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 METTL7BQ6UX53 244 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 UBR3Q6ZT12 1888 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 PLPPR4Q7Z2D5 763 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TMEM99Q8N816 258 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 OR2T33Q8NG76 320 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 OR4D11Q8NGI4 311 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 OR14K1Q8NGZ2 314 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 MUCL1Q96DR8 90 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 PRRC1Q96M27 445 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms