RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ZNF224Q9NZL3 707 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 CRNNQ9UBG3 495 aaPredicted RBP11.46□□□□□ -0.57
PRKDC-206ENST00000536429 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 POU2F3Q9UKI9 436 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 ADAM21Q9UKJ8 722 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 MGAT4BQ9UQ53 548 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 ATP23Q9Y6H3 246 aa11.46□□□□□ -0.57
PRKDC-206ENST00000536429 B2RBV5 119 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 CDC42EP2O14613 210 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 NDUFS7O75251 213 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 IGKV3-15P01624 115 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 IGLV1-44P01699 117 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 PAX1P15863 534 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF26P17031 533 aaPredicted RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 CALCRP30988 508 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 IFNA8P32881 189 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 GPR4P46093 362 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 CAPZA2P47755 286 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 MYBPC1Q00872 1141 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 PRKCDQ05655 676 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 TOP3AQ13472 1001 aaPredicted RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 SEC23BQ15437 767 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ARMC4Q5T2S8 1044 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 PODNL1Q6PEZ8 512 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF730Q6ZMV8 503 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF813Q6ZN06 617 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 YTHDF3Q7Z739 585 aaKnown RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 DTX2Q86UW9 622 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 LRRC75AQ8NAA5 344 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 SYT14Q8NB59 555 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 OR51A7Q8NH64 312 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 FGFBP3Q8TAT2 258 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 SLC7A13Q8TCU3 470 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ACOT11Q8WXI4 607 aaPredicted RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF566Q969W8 418 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 GTPBP3Q969Y2 492 aaKnown RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 PYURFQ96I23 114 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 NSL1Q96IY1 281 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 RADILQ96JH8 1075 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 ADAD1Q96M93 576 aaKnown RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 Q96MF0 132 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 TNFRSF13CQ96RJ3 184 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 FOXB1Q99853 325 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 CXorf56Q9H5V9 222 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 B3GAT2Q9NPZ5 323 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 INIPQ9NRY2 104 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 B3GNT2Q9NY97 397 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 MAGEL2Q9UJ55 1249 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 SAMD4AQ9UPU9 718 aaKnown RBP11.45□□□□□ -0.58
PRKDC-206ENST00000536429 POFUT2Q9Y2G5 429 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 HIF3AQ9Y2N7 669 aa11.45□□□□□ -0.58
PRKDC-206ENST00000536429 IGKV1D-43A0A0B4J1Z2 117 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 TRBV4-1A0A0J9YWV2 114 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 A0A1W2PRG6 482 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 TRIM64A6NGJ6 449 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 TRIM64BA6NI03 449 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 EFCAB9A8MZ26 197 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 GMNNO75496 209 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 TRMUO75648 421 aaKnown RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 IGHG1P01857 330 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 H1F0P07305 194 aaKnown RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 QDPRP09417 244 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 PATE4P0C8F1 98 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 SAGP10523 405 aaPredicted RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 CBR1P16152 277 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 RHCEP18577 417 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 ATP6V1B2P21281 511 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 TTKP33981 857 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 IDH3GP51553 393 aaPredicted RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 ATP5J2P56134 94 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 NAAAQ02083 359 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 NPRL3Q12980 569 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 ALG10Q5BKT4 473 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 SHEQ5VZ18 495 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 C11orf71Q6IPW1 123 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF627Q7L945 461 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 CIARTQ8N365 385 aaPredicted RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 CLDN22Q8N7P3 220 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 NOXO1Q8NFA2 376 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 HDAC2Q92769 488 aaKnown RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 MCHR2Q969V1 340 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 NSMCE2Q96MF7 247 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 SEPHS2Q99611 448 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 DHRS9Q9BPW9 319 aa11.44□□□□□ -0.58
PRKDC-206ENST00000536429 MRPL13Q9BYD1 178 aaKnown RBP11.44□□□□□ -0.58
PRKDC-206ENST00000536429 A0A1W2PRQ8 180 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 DHHO43323 396 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 PDE5AO76074 875 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 SLC2A10O95528 541 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 CD79AP11912 226 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 ACADSP16219 412 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FABP6P51161 128 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 CLRN1P58418 232 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 HGFACQ04756 655 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FMODQ06828 376 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 PIGFQ07326 219 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms