RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PTDSS2Q9BVG9 487 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 TINAGL1Q9GZM7 467 aaPredicted RBP10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 SPRTNQ9H040 489 aaPredicted RBP10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 UBQLN3Q9H347 655 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 ZNF71Q9NQZ8 489 aaPredicted RBP10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 CTPS2Q9NRF8 586 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 PLAGL1Q9UM63 463 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 FLNCQ14315 2725 aa10.59□□□□□ -0.71
CHRNB1-202ENST00000536404 RAB19A4D1S5 217 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 TRAPPC13A5PLN9 417 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 RIIAD1A6NNX1 92 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 PDCD5O14737 125 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SSNA1O43805 119 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 FMO6PO60774 539 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 CH25HO95992 272 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 PRF1P14222 555 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 FOLR1P15328 257 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 HPGDP15428 266 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SPI1P17947 270 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 TCN2P20062 427 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 HIST1H1TP22492 207 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 CALCRP30988 508 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 THBS2P35442 1172 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 MRPS10P82664 201 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 IL11RAQ14626 422 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 CEBPEQ15744 281 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 EIF2S3LQ2VIR3 472 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 MRM1Q6IN84 353 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SLC48A1Q6P1K1 146 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 FAM198BQ6UWH4 519 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 C3P1Q6ZMU1 363 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 LNX2Q8N448 690 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 C12orf45Q8N5I9 185 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SIRT6Q8N6T7 355 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 OR11H7Q8NGC8 314 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SAMD8Q96LT4 415 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 MAP3K3Q99759 626 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 RAB33BQ9H082 229 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ESRP2Q9H6T0 727 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 C14orf105Q9NVL8 296 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 HAO2Q9NYQ3 351 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SEMA5BQ9P283 1151 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 MYEF2Q9P2K5 600 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ZNF443Q9Y2A4 671 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SLC6A5Q9Y345 797 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 NPTNQ9Y639 398 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 NBASA2RRP1 2371 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 LOC390937A0A1W2PQ73 354 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SOCS6O14544 535 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 GPR171O14626 319 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 IFNGP01579 166 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 FBP1P09467 338 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SHC1P29353 583 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 LCN1P31025 176 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 BTCP35070 178 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 RFC3P40938 356 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 GPR4P46093 362 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 STXBP1P61764 594 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ACTA2P62736 377 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ACTG2P63267 376 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SNTB2Q13425 540 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 GSG1Q2KHT4 349 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 RNF212Q495C1 297 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SLC36A2Q495M3 483 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 B3GNTL1Q67FW5 361 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SLC25A25Q6KCM7 469 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 HEPHL1Q6MZM0 1159 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ARL9Q6T311 187 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 LYPD4Q6UWN0 246 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 OVCH1Q7RTY7 1134 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 PPP1R3BQ86XI6 285 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 VRK2Q86Y07 508 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 C2orf73Q8N5S3 287 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 FAM71CQ8NEG0 241 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 OR2L5Q8NG80 312 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 OR10H4Q8NGA5 316 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ELP4Q96EB1 424 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 SLC41A2Q96JW4 573 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 C12orf66Q96MD2 445 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 TMEM68Q96MH6 324 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 MS4A4EQ96PG1 132 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 IFT27Q9BW83 186 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 QRSL1Q9H0R6 528 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 OR52D1Q9H346 318 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ZCCHC4Q9H5U6 513 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 AKIRIN1Q9H9L7 192 aaPredicted RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 CMC2Q9NRP2 79 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 MED11Q9P086 117 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 TUBD1Q9UJT1 453 aa10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 PCDHGA9Q9Y5G4 932 aaKnown RBP10.58□□□□□ -0.72
CHRNB1-202ENST00000536404 ZNF729A6NN14 1252 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms