RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SPAG4Q9NPE6 437 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 B3GAT2Q9NPZ5 323 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 CBLN4Q9NTU7 201 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 FAIMQ9NVQ4 179 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 B3GNT2Q9NY97 397 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 ZNF224Q9NZL3 707 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
UBE3B-206ENST00000536398 BCL10O95999 233 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 TSPAN19P0C672 248 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 CD79AP11912 226 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 IFI30P13284 250 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 TCN1P20061 433 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-206ENST00000536398 APOBEC3AP31941 199 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-206ENST00000536398 MYBPC1Q00872 1141 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 HGFACQ04756 655 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 NPRL3Q12980 569 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 CLEC12BQ2HXU8 276 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 MST1LQ2TV78 715 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF544Q6NX49 715 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 SKA3Q8IX90 412 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 NRMQ8IXM6 262 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 OFCC1Q8IZS5 231 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF566Q969W8 418 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 BPIFA2Q96DR5 249 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF347Q96SE7 839 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 BDH2Q9BUT1 245 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 GRIP2Q9C0E4 1043 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 INIPQ9NRY2 104 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 TAGLN3Q9UI15 199 aa12.39□□□□□ -0.43
UBE3B-206ENST00000536398 HAX1O00165 279 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 NDUFAB1O14561 156 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 LY6G6DO95868 133 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 IGF2P01344 180 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 CRYAAP02489 173 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 QDPRP09417 244 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 FHL1Q13642 323 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 TRAM2Q15035 370 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 C3orf36Q3SXR2 165 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 VHLLQ6RSH7 139 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF627Q7L945 461 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 BIVMQ86UB2 503 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 IGFN1Q86VF2 1251 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 FAM169BQ8N8A8 192 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 SYT14Q8NB59 555 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 MAPK1IP1LQ8NDC0 245 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 ASB10Q8WXI3 467 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 LRRC37BQ96QE4 947 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 CCT8L2Q96SF2 557 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 FOXB1Q99853 325 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 KCNS3Q9BQ31 491 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 MRPL13Q9BYD1 178 aaKnown RBP12.38□□□□□ -0.43
UBE3B-206ENST00000536398 DCAF13Q9NV06 445 aaKnown RBP12.38□□□□□ -0.43
UBE3B-206ENST00000536398 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
UBE3B-206ENST00000536398 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-206ENST00000536398 TRAV27A0A087WT01 109 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 A0A087WUU8 490 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 IGHV2OR16-5A0A0B4J2B6 119 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 A0A1W2PRG6 482 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 DHHO43323 396 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 SSX4O60224 188 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
UBE3B-206ENST00000536398 DIRAS1O95057 198 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 ACADSP16219 412 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 ARR3P36575 388 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 PRKCDQ05655 676 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 ADIPOQQ15848 244 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 HIST3H3Q16695 136 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 GSG1Q2KHT4 349 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 ARMC4Q5T2S8 1044 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 CLEC9AQ6UXN8 241 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 CLDN22Q8N7P3 220 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 OR51A7Q8NH64 312 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 HDAC2Q92769 488 aaKnown RBP12.37□□□□□ -0.43
UBE3B-206ENST00000536398 MCHR2Q969V1 340 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 FBXO17Q96EF6 278 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 TNFRSF13CQ96RJ3 184 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 SH3GL3Q99963 347 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 NMNAT1Q9HAN9 279 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-206ENST00000536398 CA10Q9NS85 328 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 NDUFAF4Q9P032 175 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 V9GYQ6 96 aa12.37□□□□□ -0.43
UBE3B-206ENST00000536398 IGKV1D-43A0A0B4J1Z2 117 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 MCIDASD6RGH6 385 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 hCG_2039718K7EN88 272 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 CDC42EP2O14613 210 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 DCTN3O75935 186 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 LY6HO94772 140 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 IGHG1P01857 330 aa12.36□□□□□ -0.43
UBE3B-206ENST00000536398 ZNF26P17031 533 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms