RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DPAGT1Q9H3H5 408 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 WDR76Q9H967 626 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 NOX4Q9NPH5 578 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 TAS2R10Q9NYW0 307 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 MRM2Q9UI43 246 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 TEKT2Q9UIF3 430 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 SPATA2Q9UM82 520 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 CLEC4AQ9UMR7 237 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 AK6Q9Y3D8 172 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 ALOX12BO75342 701 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 AKR7A3O95154 331 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 PRKCAP17252 672 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
VPS33B-202ENST00000535906 HSD17B12Q53GQ0 312 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 FAM69AQ5T7M9 428 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 EEF1A1P5Q5VTE0 462 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 BAIAP2L2Q6UXY1 529 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 MAMDC2Q7Z304 686 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-202ENST00000535906 GRINAQ7Z429 371 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 TOMM5Q8N4H5 51 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 MAFAQ8NHW3 353 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-202ENST00000535906 RGP1Q92546 391 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-202ENST00000535906 PIGKQ92643 395 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 CCDC74BQ96LY2 380 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 APMAPQ9HDC9 416 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 RARRES3Q9UL19 164 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 ADAMTS9Q9P2N4 1935 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 TNRC6BQ9UPQ9 1833 aaKnown RBP12.08□□□□□ -0.48
VPS33B-202ENST00000535906 CCDC163A0A0D9SF12 145 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 C7orf66A4D0T2 115 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 ACOD1A6NK06 481 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 TMEM200CA6NKL6 621 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 A8MVM7 634 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 UPK3AO75631 287 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 RENP00797 406 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 MT-ATP6P00846 226 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 SRMP19623 302 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 DCDP81605 110 aaKnown RBP12.08□□□□□ -0.48
VPS33B-202ENST00000535906 SGCBQ16585 318 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 BCL2L15Q5TBC7 163 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 C1orf140Q5VVS0 124 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 LIPNQ5VXI9 398 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 OTPQ5XKR4 325 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 LCN10Q6JVE6 187 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 DPY19L4Q7Z388 723 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 OR2I1PQ8NGU4 316 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 SCMH1Q96GD3 660 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 CAMK2AQ9UQM7 478 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF281Q9Y2X9 895 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 EXPH5Q8NEV8 1989 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF879B4DU55 563 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 ABHD16AO95870 558 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 CD3GP09693 182 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 HOXA6P31267 233 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 SLC26A5P58743 744 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 DGCR2P98153 550 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 ACKR1Q16570 336 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF385CQ66K41 422 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 PAPD4Q6PIY7 484 aaKnown RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 EID2Q8N6I1 236 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 OR6N2Q8NGY6 317 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 METTL21AQ8WXB1 218 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 MAP6Q96JE9 813 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 ZFP3Q96NJ6 502 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 WDR77Q9BQA1 342 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 NDEL1Q9GZM8 345 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 FRRS1LQ9P0K9 344 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 COPZ2Q9P299 210 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 LAMP5Q9UJQ1 280 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 A0A1B0GTH9 108 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 CTDSPLO15194 276 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 GDF9O60383 454 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF780AO75290 641 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 DXOO77932 396 aaKnown RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 TCRBP04435 133 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 EMP2P54851 167 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 SLC6A19Q695T7 634 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 KCTD20Q7Z5Y7 419 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 SIAH3Q8IW03 269 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 FOXN4Q96NZ1 517 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 GFI1Q99684 422 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 C7orf50Q9BRJ6 194 aaKnown RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 MED28Q9H204 178 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 GAREM1Q9H706 876 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 AKIRIN1Q9H9L7 192 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 SUSD2Q9UGT4 822 aa12.07□□□□□ -0.48
VPS33B-202ENST00000535906 MRPS7Q9Y2R9 242 aaKnown RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 PCDHGA9Q9Y5G4 932 aaKnown RBP12.07□□□□□ -0.48
VPS33B-202ENST00000535906 TRBV11-1A0A0K0K1C0 115 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms