RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 PRAMEF8Q5VWM4 474 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 PRAMEF7Q5VXH5 474 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 DND1Q8IYX4 353 aaKnown RBP12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 GALNT16Q8N428 558 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 OR13H1Q8NG92 308 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNF563Q8TA94 476 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 SLC37A2Q8TED4 501 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 NPAS1Q99742 590 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 TRIM2Q9C040 744 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 IL23AQ9NPF7 189 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 C14orf105Q9NVL8 296 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 DOCK8Q8NF50 2099 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 GABARAPH6UMI1 98 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 PNPP00491 289 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 SPARCP09486 303 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 ALG11Q2TAA5 492 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 OR14A16Q8NHC5 309 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 HGDQ93099 445 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 MMABQ96EY8 250 aaPredicted RBP12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 ARPC5LQ9BPX5 153 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 TMEM231Q9H6L2 316 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 TMEM185BQ9H7F4 350 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 NUP50Q9UKX7 468 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 PLEKHA6Q9Y2H5 1048 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 C2orf16Q68DN1 1984 aa12.62□□□□□ -0.39
LPCAT3-203ENST00000535479 TRAV1-2A0A0B4J238 106 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 RPS4Y1P22090 263 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 MST1P26927 711 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 OR1D4P47884 311 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 SEC61A1P61619 476 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ACTC1P68032 377 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ACTA1P68133 377 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 GPM6BQ13491 265 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 TAF13Q15543 124 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ALG10Q5BKT4 473 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 NHLRC3Q5JS37 347 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 METTL11BQ5VVY1 283 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 OR52W1Q6IF63 320 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 TAF8Q7Z7C8 310 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 RNF113BQ8IZP6 322 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 GVQW1Q8N7I0 195 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 RAB11FIP5Q9BXF6 653 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 OR11A1Q9GZK7 315 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 DUSP22Q9NRW4 184 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNF337Q9Y3M9 751 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 LOC400499M0QZD8 3231 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CARNS1A5YM72 827 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 GALR3O60755 368 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 SERPINA3P01011 423 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 IL11P20809 199 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 MFGE8Q08431 387 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 OR7A5Q15622 319 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 Q6ZSR6 202 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 MED25Q71SY5 747 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 BCORP1Q8N888 145 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CAMKVQ8NCB2 501 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNF764Q96H86 408 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 LPAR4Q99677 370 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 SAV1Q9H4B6 383 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 B9D1Q9UPM9 204 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CXorf51AA0A1B0GTR3 108 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 SHISA8B8ZZ34 492 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 UPK3AO75631 287 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CT45A8P0DMV1 189 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CT45A9P0DMV2 189 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 S1PR1P21453 382 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ACTA2P62736 377 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ACTG2P63267 376 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 RPL18Q07020 188 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ITPRIPL2Q3MIP1 535 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CT45A2Q5DJT8 189 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 MESTQ5EB52 335 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 NKAIN2Q5VXU1 208 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ULK3Q6PHR2 472 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 GPAT4Q86UL3 456 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 ABCA7Q8IZY2 2146 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 OR1J2Q8NGS2 313 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 HERVK_113Q902F9 699 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 EXOSC3Q9NQT5 275 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CPNE7Q9UBL6 633 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 CDV3Q9UKY7 258 aaKnown RBP12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 MAFFQ9ULX9 164 aa12.61□□□□□ -0.39
LPCAT3-203ENST00000535479 TMEM235A6NFC5 223 aa12.6□□□□□ -0.39
LPCAT3-203ENST00000535479 RBBP9O75884 186 aa12.6□□□□□ -0.39
LPCAT3-203ENST00000535479 PPP3CBP16298 524 aa12.6□□□□□ -0.39
LPCAT3-203ENST00000535479 ZNHIT3Q15649 155 aaPredicted RBP12.6□□□□□ -0.39
LPCAT3-203ENST00000535479 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
LPCAT3-203ENST00000535479 LRFN4Q6PJG9 635 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms