RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PGA4P0DJD7 388 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 PGA3P0DJD8 388 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 THRBP10828 461 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 BMP4P12644 408 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 COX4I1P13073 169 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 B4GALT1P15291 398 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-215ENST00000534307 FUT4P22083 530 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 DSCR9P59020 149 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 TAS2R41P59536 307 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 NPRL3Q12980 569 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 LRRC23Q53EV4 343 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-215ENST00000534307 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 ZNF813Q6ZN06 617 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 ARPINQ7Z6K5 226 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 TREML1Q86YW5 311 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 C10orf105Q8TEF2 133 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 FBXO17Q96EF6 278 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 SLC25A44Q96H78 314 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-215ENST00000534307 SORCS2Q96PQ0 1159 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 SEPHS2Q99611 448 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 FOXB1Q99853 325 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 RHNO1Q9BSD3 238 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 PLK3Q9H4B4 646 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 GLTPQ9NZD2 209 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 A4GNTQ9UNA3 340 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 POFUT2Q9Y2G5 429 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 AP3M1Q9Y2T2 418 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 PMF1-BGLAPU3KQ54 211 aa12.17□□□□□ -0.46
SF3B2-215ENST00000534307 YLPM1P49750 1951 aaKnown RBP12.16□□□□□ -0.46
SF3B2-215ENST00000534307 RNF212BA8MTL3 300 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 B9A039 149 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 NME4O00746 187 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 RNF13O43567 381 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 CCDC22O60826 627 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 CRLF1O75462 422 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 OR7A10O76100 309 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 LY6HO94772 140 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 THBS4P35443 961 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 SNRPD2P62316 118 aaKnown RBP12.16□□□□□ -0.46
SF3B2-215ENST00000534307 SELENOWP63302 87 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 RUNX1T1Q06455 604 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 RPL18Q07020 188 aaKnown RBP12.16□□□□□ -0.46
SF3B2-215ENST00000534307 MELKQ14680 651 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 HIST3H3Q16695 136 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 GSG1Q2KHT4 349 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 TMEM239Q8WW34 195 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 ZNF566Q969W8 418 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
SF3B2-215ENST00000534307 MRPL13Q9BYD1 178 aaKnown RBP12.16□□□□□ -0.46
SF3B2-215ENST00000534307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.46
SF3B2-215ENST00000534307 TMEM129A0AVI4 362 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 NPIPB13A6NJU9 1138 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 NPIPB4C9JG80 1138 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 DYNC1I1O14576 645 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 CD5LO43866 347 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 HIST1H2ABP04908 130 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 IGFBP1P08833 259 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-215ENST00000534307 UMPSP11172 480 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 CD79AP11912 226 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 ZNF35P13682 527 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 CAPZA2P47755 286 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 PPOXP50336 477 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 LSM11P83369 360 aaKnown RBP eCLIP12.15□□□□□ -0.46
SF3B2-215ENST00000534307 LIPEQ05469 1076 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 VHLLQ6RSH7 139 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 HACD2Q6Y1H2 254 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 HIST3H2AQ7L7L0 130 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
SF3B2-215ENST00000534307 VTCN1Q7Z7D3 282 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 FAM168AQ92567 244 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 HIST1H2ACQ93077 130 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 SGTBQ96EQ0 304 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 PRRC1Q96M27 445 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 HOPXQ9BPY8 73 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-215ENST00000534307 MYLK2Q9H1R3 596 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 DENND2DQ9H6A0 471 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-215ENST00000534307 MAN2C1Q9NTJ4 1040 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 TMEM38BQ9NVV0 291 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 SNX13Q9Y5W8 968 aa12.15□□□□□ -0.46
SF3B2-215ENST00000534307 VWC2LB2RUY7 222 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 BLOC1S5-TXNDC5H3BN57 136 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 FFAR1O14842 300 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 DHHO43323 396 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 GPRIN2O60269 458 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 PIP5K1CO60331 668 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 BCL10O95999 233 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 F13BP05160 661 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 CSF3P09919 207 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 SLC25A16P16260 332 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 FUT1P19526 365 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 NR4A1P22736 598 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 AQP2P41181 271 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 SLC7A2P52569 658 aa12.14□□□□□ -0.47
SF3B2-215ENST00000534307 ZNF133P52736 654 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-215ENST00000534307 SEC24CP53992 1094 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms