RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 BPESC1Q9GZL8 116 aa15.72■□□□□ 0.11
SCN4B-205ENST00000531550 SLC17A5Q9NRA2 495 aa15.72■□□□□ 0.11
SCN4B-205ENST00000531550 RIMS3Q9UJD0 308 aa15.72■□□□□ 0.11
SCN4B-205ENST00000531550 FAAHO00519 579 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 PMS2P2O95744 297 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 GKN3PP0CG01 181 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 TFPIP10646 304 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 CFPP27918 469 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 SNRPD2P62316 118 aaKnown RBP15.71■□□□□ 0.11
SCN4B-205ENST00000531550 SLC34A1Q06495 639 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 EPS8Q12929 822 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 GK3PQ14409 553 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 CASP12Q6UXS9 341 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 C12orf54Q6X4T0 127 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 TMEM234Q8WY98 164 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 DNAJA3Q96EY1 480 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 CENPNQ96H22 339 aaPredicted RBP15.71■□□□□ 0.11
SCN4B-205ENST00000531550 PRRC1Q96M27 445 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 ACER3Q9NUN7 267 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 NKX1-2Q9UD57 310 aaPredicted RBP15.71■□□□□ 0.11
SCN4B-205ENST00000531550 A4GNTQ9UNA3 340 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 MOKQ9UQ07 419 aa15.71■□□□□ 0.11
SCN4B-205ENST00000531550 SPRY1O43609 319 aaPredicted RBP15.7■□□□□ 0.1
SCN4B-205ENST00000531550 PRG2P13727 222 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 PGCP20142 388 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 IFNA8P32881 189 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 HMGA2P52926 109 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 DEF8Q6ZN54 512 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 SLC46A3Q7Z3Q1 461 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 AMIGO2Q86SJ2 522 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 CCDC103Q8IW40 242 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.7■□□□□ 0.1
SCN4B-205ENST00000531550 LSMEM1Q8N8F7 131 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 PIK3C3Q8NEB9 887 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 ARL5BQ96KC2 179 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 DHRS1Q96LJ7 313 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 NTN4Q9HB63 628 aa15.7■□□□□ 0.1
SCN4B-205ENST00000531550 SPIN1Q9Y657 262 aaPredicted RBP15.7■□□□□ 0.1
SCN4B-205ENST00000531550 HEATR1Q9H583 2144 aaKnown RBP15.7■□□□□ 0.1
SCN4B-205ENST00000531550 J3KTA2 159 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 FFAR1O14842 300 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 DNPH1O43598 174 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 DIRAS1O95057 198 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 OR5F1O95221 314 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 THRBP10828 461 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 YAP1P46937 504 aaKnown RBP15.69■□□□□ 0.1
SCN4B-205ENST00000531550 SMIM11AP58511 58 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 ENTPD8Q5MY95 495 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 OFCC1Q8IZS5 231 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 ZNF540Q8NDQ6 660 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 VRK1Q99986 396 aaPredicted RBP15.69■□□□□ 0.1
SCN4B-205ENST00000531550 ADAM19Q9H013 955 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 TMEM27Q9HBJ8 222 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 CTPS2Q9NRF8 586 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 SLC7A10Q9NS82 523 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 UPB1Q9UBR1 384 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 CHRNA9Q9UGM1 479 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 HDGFL3Q9Y3E1 203 aa15.69■□□□□ 0.1
SCN4B-205ENST00000531550 LRP5LA4QPB2 252 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 GNGT2O14610 69 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 CASQ2O14958 399 aaPredicted RBP15.68■□□□□ 0.1
SCN4B-205ENST00000531550 UQCRBP14927 111 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 HTR2AP28223 471 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 RRM2P31350 389 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 SRP14P37108 136 aaKnown RBP15.68■□□□□ 0.1
SCN4B-205ENST00000531550 APOBEC1P41238 236 aaKnown RBP15.68■□□□□ 0.1
SCN4B-205ENST00000531550 TAS2R41P59536 307 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 PRPS1P60891 318 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 HOXC5Q00444 222 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 PIN1Q13526 163 aaPredicted RBP15.68■□□□□ 0.1
SCN4B-205ENST00000531550 OR1Q1Q15612 314 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 C1QTNF12Q5T7M4 302 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 ZNF613Q6PF04 617 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 TSPYL5Q86VY4 417 aaPredicted RBP15.68■□□□□ 0.1
SCN4B-205ENST00000531550 ADAMTS16Q8TE57 1224 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 NRBF2Q96F24 287 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 EPYCQ99645 322 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 ANKRD19PQ9H560 264 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 REEP1Q9H902 201 aa15.68■□□□□ 0.1
SCN4B-205ENST00000531550 NMNAT1Q9HAN9 279 aaPredicted RBP15.68■□□□□ 0.1
SCN4B-205ENST00000531550 TRAPPC13A5PLN9 417 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 CPSF4LA6NMK7 179 aaKnown RBP15.67■□□□□ 0.1
SCN4B-205ENST00000531550 WNT11O96014 354 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 H1F0P07305 194 aaKnown RBP15.67■□□□□ 0.1
SCN4B-205ENST00000531550 SERPINF1P36955 418 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 OR2B6P58173 313 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 COPZ1P61923 177 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 TGFBR3Q03167 851 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 ST3GAL3Q11203 375 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 TSPO2Q5TGU0 170 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 WBP2NLQ6ICG8 309 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 KLHL24Q6TFL4 600 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 OR5K1Q8NHB7 308 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 ZNF563Q8TA94 476 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 FNDC11Q9BVV2 318 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 OR11A1Q9GZK7 315 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 SEMA6AQ9H2E6 1030 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 CA10Q9NS85 328 aa15.67■□□□□ 0.1
SCN4B-205ENST00000531550 TMEFF2Q9UIK5 374 aaPredicted RBP15.67■□□□□ 0.1
SCN4B-205ENST00000531550 FLVCR1Q9Y5Y0 555 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms