RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RPRD1BQ9NQG5 326 aaKnown RBP16.9■□□□□ 0.3
SMPD1-205ENST00000531303 DNAJC27Q9NZQ0 273 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 PCDHGB5Q9Y5G0 923 aa16.9■□□□□ 0.3
SMPD1-205ENST00000531303 PHF3Q92576 2039 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 MYO7BQ6PIF6 2116 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 PRSS37A4D1T9 235 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 OR6C68A6NDL8 312 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 ZNF724A8MTY0 619 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 PRR23D1E9PI22 279 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 AKAP8O43823 692 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 MRPL33O75394 65 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 IGHG1P01857 330 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 HOXD4P09016 255 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 PRR23D2P0DMB1 279 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 AGTR1P30556 359 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 CASP6P55212 293 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 LGALS3BPQ08380 585 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 MED21Q13503 144 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 FAM205BPQ63HN1 556 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 KRT80Q6KB66 452 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 CXXC5Q7LFL8 322 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 HDDC2Q7Z4H3 204 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 BBS1Q8NFJ9 593 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 OR6N1Q8NGY5 312 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 RHOXF1Q8NHV9 184 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 GMPPAQ96IJ6 420 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 LRR1Q96L50 414 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 ADAD1Q96M93 576 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 TSSK2Q96PF2 358 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 HCAR1Q9BXC0 346 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 SYT4Q9H2B2 425 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 SRA1Q9HD15 236 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 INTS1Q8N201 2190 aaKnown RBP16.89■□□□□ 0.29
SMPD1-205ENST00000531303 POLEQ07864 2286 aa16.89■□□□□ 0.29
SMPD1-205ENST00000531303 MBD3L4A6NDZ8 208 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 MBD3L3A6NE82 208 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 MBD3L5A6NJ08 208 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 IGHV3-9P01782 118 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 GYPBP06028 91 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 GLI4P10075 376 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 CLUP10909 449 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 PAICSP22234 425 aaKnown RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 EDNRAP25101 427 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 SNRPGP62308 76 aaKnown RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 EFNB1P98172 346 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 PMPCAQ10713 525 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 FOXF2Q12947 444 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 OR2A2Q6IF42 318 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 NCCRP1Q6ZVX7 275 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 ADCK1Q86TW2 530 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 MBD3L2Q8NHZ7 208 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 TRUB1Q8WWH5 349 aaKnown RBP16.88■□□□□ 0.29
SMPD1-205ENST00000531303 PTP4A1Q93096 173 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 TTYH2Q9BSA4 534 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 OR51V1Q9H2C8 321 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 GLRX2Q9NS18 164 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 CLN6Q9NWW5 311 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 UBAP1Q9NZ09 502 aa16.88■□□□□ 0.29
SMPD1-205ENST00000531303 SLC22A23A1A5C7 686 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 FAM171A2A8MVW0 826 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 M0R3G1 203 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 MPZL2O60487 215 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 SS18L1O75177 396 aaPredicted RBP16.87■□□□□ 0.29
SMPD1-205ENST00000531303 ENTPD6O75354 484 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 SLC43A1O75387 559 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 ZNF432O94892 652 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 TOXO94900 526 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 IL2RAP01589 272 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 PGA4P0DJD7 388 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 PGA3P0DJD8 388 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 GABRB1P18505 474 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 FMO3P31513 532 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 CSNK1A1P48729 337 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 TLE1Q04724 770 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 FMODQ06828 376 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 CDK5R2Q13319 367 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 IGFBP7Q16270 282 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 KLHL12Q53G59 568 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 ZNF100Q8IYN0 542 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 TMEM123Q8N131 208 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 NOXO1Q8NFA2 376 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 OR51L1Q8NGJ5 315 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 APH1BQ8WW43 257 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 TMEM45BQ96B21 275 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 KCNK17Q96T54 332 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 DDOQ99489 341 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 PARPBPQ9NWS1 579 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 H2AFY2Q9P0M6 372 aaPredicted RBP16.87■□□□□ 0.29
SMPD1-205ENST00000531303 RCE1Q9Y256 329 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 HSPE1-MOB4S4R3N1 261 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 KALRNO60229 2985 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 PCNX1Q96RV3 2341 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 ESPL1Q14674 2120 aa16.87■□□□□ 0.29
SMPD1-205ENST00000531303 SLC16A7O60669 478 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 WBP4O75554 376 aaKnown RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 TMIGD3P0DMS9 266 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 PYCR1P32322 319 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 CENPAP49450 140 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 NUDT6P53370 316 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms