RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 CCDC163A0A0D9SF12 145 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 TSPAN11A1L157 253 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 GREM1O60565 184 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 HOXD12P35452 270 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 FASLGP48023 281 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 RPL18Q07020 188 aaKnown RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 CAMKMTQ7Z624 323 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 SGCZQ96LD1 299 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 ZNF705EA8MWA4 302 aaPredicted RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 M0R036 132 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 SC5DO75845 299 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 POU3F2P20265 443 aaPredicted RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 MSX1P28360 303 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 MAGEB1P43366 347 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 MTNR1BP49286 362 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 EIF5AP63241 154 aaKnown RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 ALKBH1Q13686 389 aaKnown RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 GALEQ14376 348 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 OR10K2Q6IF99 312 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 OR4Q3Q8NH05 313 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 PIGCQ92535 297 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 C1orf198Q9H425 327 aa14.08□□□□□ -0.16
USP35-203ENST00000529308 PCYT1BQ9Y5K3 369 aaPredicted RBP14.08□□□□□ -0.16
USP35-203ENST00000529308 IGHV5-51A0A0C4DH38 117 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 M0QYG6 137 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 AGPAT2O15120 278 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SURF4O15260 269 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 GLCEO94923 617 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 CNOT4O95628 575 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 PSMB1P20618 241 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 SEC61A1P61619 476 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 TEX19Q8NA77 164 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SPTSSAQ969W0 71 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 RNF170Q96K19 258 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SIRT3Q9NTG7 399 aaPredicted RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 KCNN3Q9UGI6 736 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 MLXQ9UH92 298 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SIX6O95475 246 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 TCRBP04435 133 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 RBMS1P29558 406 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 RAB2AP61019 212 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 MPEG1Q2M385 716 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SLC36A2Q495M3 483 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 CCDC28AQ8IWP9 274 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 COX14Q96I36 57 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 ZNF346Q9UL40 294 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 SLC22A13Q9Y226 551 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 TRBV5-3A0A0A0MS03 114 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SHISA8B8ZZ34 492 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 AKAIN1P0CW23 69 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 HTR3AP46098 478 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 FAM76BQ5HYJ3 339 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 OR2I1PQ8NGU4 316 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 NDUFB11Q9NX14 153 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 CTSFQ9UBX1 484 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 FBXL2Q9UKC9 423 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 MMACHCQ9Y4U1 282 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 PCDHGA1Q9Y5H4 931 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 TRABD2BA6NFA1 517 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 K7EQS6 105 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 HOXB5P09067 269 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 CT62P0C5K7 136 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 GLI4P10075 376 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 PCBP4P57723 403 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 SF3B4Q15427 424 aaKnown RBP eCLIP14.07□□□□□ -0.164e-14■■■■■ 47.2
USP35-203ENST00000529308 C8orf82Q6P1X6 216 aaPredicted RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 OR4D11Q8NGI4 311 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 SLIRPQ9GZT3 109 aaKnown RBP14.07□□□□□ -0.16
USP35-203ENST00000529308 SH3BGRL2Q9UJC5 107 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 PADI1Q9ULC6 663 aa14.07□□□□□ -0.16
USP35-203ENST00000529308 MALLQ13021 153 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 OR1J4Q8NGS1 313 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 EMC7Q9NPA0 242 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 UBE2J1Q9Y385 318 aaPredicted RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 HSPB6O14558 160 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 HLA-AP01891 365 aaKnown RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 APOC1P02654 83 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 PVALBP20472 110 aaPredicted RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 RFC3P40938 356 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 DGCR2P98153 550 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 ZNF616Q08AN1 781 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 ZXDCQ2QGD7 858 aaPredicted RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 METAP1DQ6UB28 335 aaPredicted RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 SPAG16Q8N0X2 631 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 DERL3Q96Q80 235 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 SEC22CQ9BRL7 303 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 PCDHB16Q9NRJ7 776 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 PLXNB2O15031 1838 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 SCN10AQ9Y5Y9 1956 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 H7C417 338 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 CDC42EP2O14613 210 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 FFAR1O14842 300 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 OR7C1O76099 320 aaPredicted RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 UBL3O95164 117 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 PIPP12273 146 aaPredicted RBP14.06□□□□□ -0.16
USP35-203ENST00000529308 HTR2CP28335 458 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 PPICP45877 212 aa14.06□□□□□ -0.16
USP35-203ENST00000529308 HNRNPFP52597 415 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms