RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SPATA5L1Q9BVQ7 753 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF416Q9BWM5 594 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 TREM2Q9NZC2 230 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF346Q9UL40 294 aaKnown RBP16.05■□□□□ 0.16
CAPN1-206ENST00000526966 FZR1Q9UM11 496 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 GMEB1Q9Y692 573 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 MEGF8Q7Z7M0 2845 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF726A6NNF4 738 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 LRRN3E7EW58 273 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 PLPP3O14495 311 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 WIPF1O43516 503 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 SPRY1O43609 319 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-206ENST00000526966 TPST2O60704 377 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 SERPINA5P05154 406 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 CSNK1A1P48729 337 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 RGS8P57771 180 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-206ENST00000526966 HILS1P60008 231 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 CDK6Q00534 326 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 SWT1Q5T5J6 900 aaKnown RBP16.04■□□□□ 0.16
CAPN1-206ENST00000526966 SHQ1Q6PI26 577 aaKnown RBP16.04■□□□□ 0.16
CAPN1-206ENST00000526966 USP43Q70EL4 1123 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 PIWIL3Q7Z3Z3 882 aaKnown RBP16.04■□□□□ 0.16
CAPN1-206ENST00000526966 KRT73Q86Y46 540 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 SKA3Q8IX90 412 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 FGFBP3Q8TAT2 258 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF418Q8TF45 676 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-206ENST00000526966 WFDC6Q9BQY6 131 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM27Q9HBJ8 222 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 SELENONQ9NZV5 590 aa16.04■□□□□ 0.16
CAPN1-206ENST00000526966 TRAV20A0A0B4J274 112 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 A0A1W2PPW3 197 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 PPIHO43447 177 aaKnown RBP16.03■□□□□ 0.16
CAPN1-206ENST00000526966 PNPP00491 289 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 MT-ATP6P00846 226 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 NAT2P11245 290 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 LSP1P33241 339 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 ARFIP2P53365 341 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 SLC18A1P54219 525 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 AGBL2Q5U5Z8 902 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 WDR88Q6ZMY6 472 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 C1orf229Q6ZS94 237 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-206ENST00000526966 RNF217Q8TC41 542 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM54Q969K7 222 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 TLCD1Q96CP7 247 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 ZMYND19Q96E35 227 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM38AQ9H6F2 299 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 G6PC2Q9NQR9 355 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 SLAMF8Q9P0V8 285 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 DUSP13Q9UII6 198 aa16.03■□□□□ 0.16
CAPN1-206ENST00000526966 IGLV3-9A0A075B6K5 115 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 TRBV5-3A0A0A0MS03 114 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM89A2RUT3 159 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 PRORSD1PA6NEY8 169 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 PATE4P0C8F1 98 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 AHCYP23526 432 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 MAGEB1P43366 347 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 CDH12P55289 794 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 BIDP55957 195 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 ACTG1P63261 375 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 RGS7BPQ6MZT1 257 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-206ENST00000526966 BHLHE22Q8NFJ8 381 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-206ENST00000526966 OR5J2Q8NH18 312 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 OR6X1Q8NH79 312 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 FAM216AQ8WUB2 273 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 EVA1AQ9H8M9 152 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 GLTPQ9NZD2 209 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 PCDHB10Q9UN67 800 aa16.02■□□□□ 0.16
CAPN1-206ENST00000526966 PKD1L1Q8TDX9 2849 aa16.02■□□□□ 0.15
CAPN1-206ENST00000526966 C17orf100A8MU93 164 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 SERPINI2O75830 405 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 AVPP01185 164 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 EPHA1P21709 976 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 PPIBP23284 216 aaKnown RBP16.01■□□□□ 0.15
CAPN1-206ENST00000526966 MYBPC1Q00872 1141 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 SCARB2Q14108 478 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 NKPD1Q17RQ9 610 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 MMEL1Q495T6 779 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 EPGNQ6UW88 154 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 LINC00114Q6XXX2 140 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 RANBP3LQ86VV4 465 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-206ENST00000526966 FUNDC1Q8IVP5 155 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 SLC22A24Q8N4F4 322 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 TEX29Q8N6K0 151 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 IKZF5Q9H5V7 419 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 SLC52A3Q9NQ40 469 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 TMEM38BQ9NVV0 291 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 VAPAQ9P0L0 249 aa16.01■□□□□ 0.15
CAPN1-206ENST00000526966 ARHGAP32A7KAX9 2087 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 SLC22A23A1A5C7 686 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 FMO6PO60774 539 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 ENTPD5O75356 428 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 CLPTM1O96005 669 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 ADORA3P0DMS8 318 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 OR8G3PP0DMU2 310 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 ZNF250P15622 560 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 EGR1P18146 543 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 GPX2P18283 190 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 PAGE3Q5JUK9 113 aa16■□□□□ 0.15
CAPN1-206ENST00000526966 FAHD2BQ6P2I3 314 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms