RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 KCNK17Q96T54 332 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 MNTQ99583 582 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 SMAD5Q99717 465 aaKnown RBP18.34■□□□□ 0.53
SMCO4-203ENST00000526869 ARHGAP9Q9BRR9 750 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 DKK4Q9UBT3 224 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 AKAP13Q12802 2813 aa18.33■□□□□ 0.53
SMCO4-203ENST00000526869 IGLV1-36A0A0B4J1U3 117 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 CENPBD1B2RD01 187 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 ACOT7O00154 380 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 SLC22A1O15245 554 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 TFP02787 698 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 MRPL3P09001 348 aaKnown RBP18.33■□□□□ 0.52
SMCO4-203ENST00000526869 HSMCR30P0CW71 290 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 CPEP16870 476 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 PPIAP62937 165 aaKnown RBP18.33■□□□□ 0.52
SMCO4-203ENST00000526869 TPBGQ13641 420 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 TSTQ16762 297 aaKnown RBP18.33■□□□□ 0.52
SMCO4-203ENST00000526869 TIMM50Q3ZCQ8 353 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 PDSS1Q5T2R2 415 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 OR2G6Q5TZ20 316 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 ZNF322Q6U7Q0 402 aaPredicted RBP18.33■□□□□ 0.52
SMCO4-203ENST00000526869 SLC16A9Q7RTY1 509 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 SLC35F2Q8IXU6 374 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 OR51L1Q8NGJ5 315 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 ADAD1Q96M93 576 aaKnown RBP18.33■□□□□ 0.52
SMCO4-203ENST00000526869 ALG8Q9BVK2 526 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 NUAK2Q9H093 628 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 ACKR4Q9NPB9 350 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 B9D1Q9UPM9 204 aa18.33■□□□□ 0.52
SMCO4-203ENST00000526869 TRAV17A0A0B4J275 112 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ZNF814B7Z6K7 855 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 DCTN6O00399 190 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 TNFSF11O14788 317 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 AKAP8O43823 692 aaKnown RBP18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ZNF43P17038 809 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 SPINK2P20155 84 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 PLA2G5P39877 138 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 CLDN20P56880 219 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ACTA2P62736 377 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ACTG2P63267 376 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ZNF85Q03923 595 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 DOC2BQ14184 412 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 BCL2A1Q16548 175 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 HBMQ6B0K9 141 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ATCAYQ86WG3 371 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 ERI1Q8IV48 349 aaKnown RBP18.32■□□□□ 0.52
SMCO4-203ENST00000526869 TIGD4Q8IY51 512 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 FAM109AQ8N4B1 249 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 OR6X1Q8NH79 312 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 FNDC8Q8TC99 324 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 TSSK2Q96PF2 358 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 SF3B5Q9BWJ5 86 aaKnown RBP18.32■□□□□ 0.52
SMCO4-203ENST00000526869 YIPF3Q9GZM5 350 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 SRA1Q9HD15 236 aaKnown RBP18.32■□□□□ 0.52
SMCO4-203ENST00000526869 TIGARQ9NQ88 270 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 NDUFB11Q9NX14 153 aa18.32■□□□□ 0.52
SMCO4-203ENST00000526869 FAM166BA8MTA8 275 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 EIF1AYO14602 144 aaKnown RBP18.31■□□□□ 0.52
SMCO4-203ENST00000526869 MT-ND5P03915 603 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 MAGEA5P43359 124 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 SH3BGRP55822 239 aaPredicted RBP18.31■□□□□ 0.52
SMCO4-203ENST00000526869 BIDP55957 195 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 CARD18P57730 90 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 RUNX1T1Q06455 604 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 SSX1Q16384 188 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 IGFL3Q6UXB1 125 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.31■□□□□ 0.52
SMCO4-203ENST00000526869 SYS1Q8N2H4 156 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 GATAD2BQ8WXI9 593 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 TM9SF4Q92544 642 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 SLC25A44Q96H78 314 aaPredicted RBP18.31■□□□□ 0.52
SMCO4-203ENST00000526869 TXNDC15Q96J42 360 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 MED29Q9NX70 200 aa18.31■□□□□ 0.52
SMCO4-203ENST00000526869 PCDHGA9Q9Y5G4 932 aaKnown RBP18.31■□□□□ 0.52
SMCO4-203ENST00000526869 A0A1W2PQL4 384 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-203ENST00000526869 SELENOFO60613 162 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 SLC16A7O60669 478 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 ATE1O95260 518 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 ACTL6AO96019 429 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 IGHG1P01857 330 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 NR2C1P13056 603 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 ENPP1P22413 925 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 RFC3P40938 356 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 NAA10P41227 235 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-203ENST00000526869 CD97P48960 835 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 DBPQ10586 325 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-203ENST00000526869 CDONQ4KMG0 1287 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 GDPGP1Q6ZNW5 385 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 GPAT4Q86UL3 456 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 NOXO1Q8NFA2 376 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 SPRYD4Q8WW59 207 aaPredicted RBP18.3■□□□□ 0.52
SMCO4-203ENST00000526869 SLC39A7Q92504 469 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 UFD1Q92890 307 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 TBX5Q99593 518 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 TIMP4Q99727 224 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 MRPL13Q9BYD1 178 aaKnown RBP18.3■□□□□ 0.52
SMCO4-203ENST00000526869 SRXN1Q9BYN0 137 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 BABAM2Q9NXR7 383 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 CNTRLQ7Z7A1 2325 aa18.3■□□□□ 0.52
SMCO4-203ENST00000526869 ZNF670-ZNF695F2Z2N8 137 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms