RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF385AQ96PM9 386 aaKnown RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF587Q96SQ5 575 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 TRIM15Q9C019 465 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 MRPL39Q9NYK5 338 aaKnown RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 KLHL13Q9P2N7 655 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 GDF2Q9UK05 429 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 KCNS2Q9ULS6 477 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 MED31Q9Y3C7 131 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 FAM32AQ9Y421 112 aaKnown RBP9.58□□□□□ -0.88
NEDD8-204ENST00000526430 AP4S1Q9Y587 144 aa9.58□□□□□ -0.88
NEDD8-204ENST00000526430 ERICH4A6NGS2 130 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 EIF1BO60739 113 aaKnown RBP9.57□□□□□ -0.88
NEDD8-204ENST00000526430 SS18L1O75177 396 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-204ENST00000526430 KRT36O76013 467 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 OR7A10O76100 309 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF432O94892 652 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 MT-ATP6P00846 226 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 GASTP01350 101 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 IFI30P13284 250 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 AGTR1P30556 359 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 GZMKP49863 264 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 DEFA6Q01524 100 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 SPIBQ01892 262 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 ZP4Q12836 540 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 OTUD3Q5T2D3 398 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-204ENST00000526430 HIST2H2BDQ6DRA6 164 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 FAM166AQ6J272 317 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 CLEC2AQ6UVW9 174 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 IL17RELQ6ZVW7 336 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 CREB3L2Q70SY1 520 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 H1FNTQ75WM6 255 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-204ENST00000526430 CHMP1BQ7LBR1 199 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 CYP4Z1Q86W10 505 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 HS3ST5Q8IZT8 346 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 SLC43A2Q8N370 569 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 ADPRHL1Q8NDY3 354 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 PYDC1Q8WXC3 89 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 BPIFA2Q96DR5 249 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 SGTBQ96EQ0 304 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 TXNDC15Q96J42 360 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 EPYCQ99645 322 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 KLHL4Q9C0H6 718 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 OR10A4Q9H209 315 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 TIGARQ9NQ88 270 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 PLSCR4Q9NRQ2 329 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 SELENONQ9NZV5 590 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 MCTS1Q9ULC4 181 aaKnown RBP9.57□□□□□ -0.88
NEDD8-204ENST00000526430 B3GALT5Q9Y2C3 310 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 RNF115Q9Y4L5 304 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 FLVCR1Q9Y5Y0 555 aa9.57□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF724A8MTY0 619 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 TNFRSF11BO00300 401 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 CLOCKO15516 846 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 TRAF3IP2O43734 574 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-204ENST00000526430 SSX4O60224 188 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 CIB2O75838 187 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 SYNGR4O95473 234 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 CST1P01037 141 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 YES1P07947 543 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 PRKACGP22612 351 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 GSSP48637 474 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 RASGEF1BQ0VAM2 473 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 ATP6AP1Q15904 470 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 MICAQ29983 383 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 PGGHGQ32M88 737 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 FGD3Q5JSP0 725 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 PGBD2Q6P3X8 592 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF730Q6ZMV8 503 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 FAM214BQ7L5A3 538 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 P4HA3Q7Z4N8 544 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 AMIGO2Q86SJ2 522 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 DTX2Q86UW9 622 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 SCAIQ8N9R8 606 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF610Q8N9Z0 462 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 OR9Q2Q8NGE9 314 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 OR5J2Q8NH18 312 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 MOSPD2Q8NHP6 518 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 LRTOMTQ8WZ04 291 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 C1orf159Q96HA4 380 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 GMPPAQ96IJ6 420 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-204ENST00000526430 FAM46AQ96IP4 442 aaKnown RBP9.56□□□□□ -0.88
NEDD8-204ENST00000526430 OXGR1Q96P68 337 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 TRAF4Q9BUZ4 470 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-204ENST00000526430 SF3B5Q9BWJ5 86 aaKnown RBP9.56□□□□□ -0.88
NEDD8-204ENST00000526430 TAPBPLQ9BX59 468 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 GP6Q9HCN6 339 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 DNAJB9Q9UBS3 223 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 ZNF229Q9UJW7 825 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 SIGLEC7Q9Y286 467 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 U3KQV3 271 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 ARFGEF3Q5TH69 2177 aa9.56□□□□□ -0.88
NEDD8-204ENST00000526430 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
NEDD8-204ENST00000526430 HTR3EA5X5Y0 456 aa9.55□□□□□ -0.88
NEDD8-204ENST00000526430 STAMBPO95630 424 aa9.55□□□□□ -0.88
NEDD8-204ENST00000526430 HOXB6P17509 224 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms