RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 DNAJA4Q8WW22 397 aaPredicted RBP11.79□□□□□ -0.52
CSTF3-206ENST00000524827 C22orf15Q8WYQ4 148 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 MAL2Q969L2 176 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 ASPNQ9BXN1 380 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
CSTF3-206ENST00000524827 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 BCL2L10Q9HD36 194 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
CSTF3-206ENST00000524827 NKIRAS2Q9NYR9 191 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 OPN4Q9UHM6 478 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 GPR160Q9UJ42 338 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 WIPI2Q9Y4P8 454 aa11.79□□□□□ -0.52
CSTF3-206ENST00000524827 IGLV3-9A0A075B6K5 115 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 IGHV1-69-2A0A0G2JMI3 117 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 CLDN25C9JDP6 229 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 SERPINI2O75830 405 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 ZNF250P15622 560 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 EPHA3P29320 983 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 CSNK1A1P48729 337 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 SELENOVP59797 346 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 TEKQ02763 1124 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 STX3Q13277 289 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 PMS2P3Q13401 168 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 PDCD4Q53EL6 469 aaKnown RBP11.78□□□□□ -0.52
CSTF3-206ENST00000524827 USP51Q70EK9 711 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 MIER2Q8N344 545 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 SLC30A7Q8NEW0 376 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 BBS10Q8TAM1 723 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 SYNPRQ8TBG9 265 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
CSTF3-206ENST00000524827 MOGAT1Q96PD6 335 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 EPYCQ99645 322 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 WDR55Q9H6Y2 383 aaPredicted RBP11.78□□□□□ -0.52
CSTF3-206ENST00000524827 C7orf69Q9H7B7 122 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 A4GALTQ9NPC4 353 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 MRPL39Q9NYK5 338 aaKnown RBP11.78□□□□□ -0.52
CSTF3-206ENST00000524827 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
CSTF3-206ENST00000524827 SLC22A23A1A5C7 686 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 LRRN3E7EW58 273 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
CSTF3-206ENST00000524827 SLC22A3O75751 556 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 ARAFP10398 606 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 CCL2P13500 99 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 GATA3P23771 443 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 FPR2P25090 351 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 PRKAR1BP31321 381 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 RAD52P43351 418 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 BIDP55957 195 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 DEFA6Q01524 100 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 RBBP4Q09028 425 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 BST1Q10588 318 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 C6orf10Q5SRN2 563 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 FAM91A1Q658Y4 838 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 ULK3Q6PHR2 472 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 ZNF771Q7L3S4 317 aaPredicted RBP11.77□□□□□ -0.53
CSTF3-206ENST00000524827 PIWIL3Q7Z3Z3 882 aaKnown RBP11.77□□□□□ -0.53
CSTF3-206ENST00000524827 PXKQ7Z7A4 578 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 SLC22A24Q8N4F4 322 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 DVL3Q92997 716 aaPredicted RBP11.77□□□□□ -0.53
CSTF3-206ENST00000524827 SLC47A1Q96FL8 570 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 ITCHQ96J02 903 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 RMND5AQ9H871 391 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 NTN4Q9HB63 628 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 CDH20Q9HBT6 801 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
CSTF3-206ENST00000524827 CMYA5Q8N3K9 4069 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 C5orf58C9J3I9 102 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 PLPP3O14495 311 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TM9SF1O15321 606 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TPD52L2O43399 206 aaKnown RBP11.76□□□□□ -0.53
CSTF3-206ENST00000524827 LCKP06239 509 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 BMP2P12643 396 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 IDO1P14902 403 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 ETS2P15036 469 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 AHCYP23526 432 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 NCALDP61601 193 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 GLO1Q04760 184 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 RGNQ15493 299 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 DHRS4L2Q6PKH6 230 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TREML4Q6UXN2 200 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 MSANTD1Q6ZTZ1 278 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 C10orf53Q8N6V4 93 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 SIGLECL1Q8N7X8 197 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 ZNF519Q8TB69 540 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 RAB1CQ92928 201 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TMEM54Q969K7 222 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TIMD4Q96H15 378 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 SH3GL3Q99963 347 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 GAL3ST1Q99999 423 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 C1QTNF5Q9BXJ0 243 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TCF7L2Q9NQB0 619 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 DECR2Q9NUI1 292 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
CSTF3-206ENST00000524827 GLTPQ9NZD2 209 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms